RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MAS1P04201 325 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 MYL9P24844 172 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 CD40P25942 277 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 PPP1CBP62140 327 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 LINC01560Q8TB33 94 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 DACH2Q96NX9 599 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 SP140LQ9H930 580 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 CCDC59Q9P031 241 aaKnown RBP12.51□□□□□ -0.41
LRIF1-202ENST00000485275 PLEKHB1Q9UF11 243 aaPredicted RBP12.51□□□□□ -0.41
LRIF1-202ENST00000485275 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
LRIF1-202ENST00000485275 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 SIAH2O43255 324 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 CD2P06729 351 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 MPV17P39210 176 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 CRIP3Q6Q6R5 217 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 OR5AS1Q8N127 324 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 OR56B2PQ8NGI1 322 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 OR1J1Q8NGS3 322 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 OR13C9Q8NGT0 318 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 SLC25A40Q8TBP6 338 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 AKAP1Q92667 903 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRIF1-202ENST00000485275 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
LRIF1-202ENST00000485275 PLEKHA1Q9HB21 404 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 ZNF391Q9UJN7 358 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 RHBDD3Q9Y3P4 386 aa12.5□□□□□ -0.41
LRIF1-202ENST00000485275 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
LRIF1-202ENST00000485275 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
LRIF1-202ENST00000485275 J3QW42 95 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 CLDN14O95500 239 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 THBS2P35442 1172 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 DDOSTP39656 456 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
LRIF1-202ENST00000485275 SORDQ00796 357 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 UBE2V2Q15819 145 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 ALKBH6Q3KRA9 238 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 PGAP1Q75T13 922 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 SEMA6DQ8NFY4 1073 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 UBASH3BQ8TF42 649 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 MARS2Q96GW9 593 aaKnown RBP12.49□□□□□ -0.41
LRIF1-202ENST00000485275 CHST5Q9GZS9 411 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
LRIF1-202ENST00000485275 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 FOXJ3Q9UPW0 622 aa12.49□□□□□ -0.41
LRIF1-202ENST00000485275 DHRS7CA6NNS2 312 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 C19orf84I3L1E1 186 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SLC2A2P11168 524 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 PPP3CBP16298 524 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 ZNF20P17024 532 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 RAB3BP20337 219 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 AGAP20933 346 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 GNALP38405 381 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 BSPH1Q075Z2 132 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SRSF1Q07955 248 aaKnown RBP eCLIP12.48□□□□□ -0.411e-7■□□□□ 10.1
LRIF1-202ENST00000485275 C1QTNF12Q5T7M4 302 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 TMEM42Q69YG0 159 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 FBXW12Q6X9E4 464 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 MRPL21Q7Z2W9 205 aaKnown RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SERPINA12Q8IW75 414 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 ZNF808Q8N4W9 903 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 THRSPQ92748 146 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 FGF23Q9GZV9 251 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 NXF2Q9GZY0 626 aaKnown RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 EIF3KQ9UBQ5 218 aaKnown RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 FZR1Q9UM11 496 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 A0A0B4J203 849 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 MTRF1O75570 445 aaKnown RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 ATF1P18846 271 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 THBS4P35443 961 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 MALLQ13021 153 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 XKRXQ6PP77 449 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 OR1M1Q8NGA1 313 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 MYO18BQ8IUG5 2567 aa12.48□□□□□ -0.41
LRIF1-202ENST00000485275 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
LRIF1-202ENST00000485275 PLCE1Q9P212 2302 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 ABCD4O14678 606 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 CRYAAP02489 173 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 ZNF12P17014 697 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 MAP2K3P46734 347 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 RIPPLY1Q0D2K3 151 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 PSG7Q13046 419 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 NPRL2Q8WTW4 380 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 DVL3Q92997 716 aaPredicted RBP12.47□□□□□ -0.41
LRIF1-202ENST00000485275 CMBLQ96DG6 245 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 GPR173Q9NS66 373 aa12.47□□□□□ -0.41
LRIF1-202ENST00000485275 CGGBP1Q9UFW8 167 aaPredicted RBP12.47□□□□□ -0.41
LRIF1-202ENST00000485275 GPR160Q9UJ42 338 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms