RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SLC37A1P57057 533 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 TAS2R31P59538 309 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 TMEM234Q8WY98 164 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 LIN37Q96GY3 246 aaPredicted RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 REEP6Q96HR9 211 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 GPX7Q96SL4 187 aaPredicted RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 METTL7AQ9H8H3 244 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 SMCO4Q9NRQ5 59 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 LAMA1P25391 3075 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 CHD9Q3L8U1 2897 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 RAB19A4D1S5 217 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 VSTM2BA6NLU5 285 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 H0YIZ8 118 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 MBTPS2O43462 519 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 HSF1Q00613 529 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 FUT7Q11130 342 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 HNF4GQ14541 408 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 ISXQ2M1V0 245 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 TSPO2Q5TGU0 170 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 ZNF529Q6P280 563 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 C20orf196Q8IYI0 205 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 NKAIN3Q8N8D7 197 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 NRIP2Q9BQI9 281 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 FAM221BA6H8Z2 402 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 ZNF735P0CB33 412 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 LPAR6P43657 344 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 UNC119Q13432 240 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 ZNF260Q3ZCT1 412 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 NCMAPQ5T1S8 102 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 ZNF565Q8N9K5 539 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 OR8U1Q8NH10 309 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
VPS52-218ENST00000482399 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 GLYATL2Q8WU03 294 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 PHYHIPLQ96FC7 376 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 TCTN2Q96GX1 697 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 KCNJ16Q9NPI9 418 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 FLVCR1Q9Y5Y0 555 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 MYO7BQ6PIF6 2116 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 FAM230AA0A1W2PPH8 454 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 PRAMEF26H0Y7S4 382 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 ADAM10O14672 748 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 CD8AP01732 235 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 BGLAPP02818 100 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 FABP1P07148 127 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 NME1P15531 152 aaKnown RBP11.31□□□□□ -0.6
VPS52-218ENST00000482399 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
VPS52-218ENST00000482399 FHITP49789 147 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 RIPPLY1Q0D2K3 151 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.31□□□□□ -0.6
VPS52-218ENST00000482399 C14orf28Q4W4Y0 310 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 SPIN3Q5JUX0 258 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 PRAMEF20Q5VT98 475 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 UQCC3Q6UW78 93 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 OR4A4PQ8NGN8 299 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 KIRREL1Q96J84 757 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 SCGB3A2Q96PL1 93 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 FAM117AQ9C073 453 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 ZMAT5Q9UDW3 170 aaKnown RBP11.31□□□□□ -0.6
VPS52-218ENST00000482399 PCDHGA1Q9Y5H4 931 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 MMP24Q9Y5R2 645 aa11.31□□□□□ -0.6
VPS52-218ENST00000482399 A0A1W2PPH5 198 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 LINC00587B1AMM8 73 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 G3V3Y1 287 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 PLPP3O14495 311 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 EIF4E2O60573 245 aaKnown RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 FCGR2AP12318 317 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 ZNF345Q14585 488 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 GRINAQ7Z429 371 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 SGPP2Q8IWX5 399 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 SDHAF3Q9NRP4 125 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 KLHL13Q9P2N7 655 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 NXT1Q9UKK6 140 aaKnown RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 WIF1Q9Y5W5 379 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 TNFRSF10CO14798 259 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 ANGPTL7O43827 346 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 SLC25A4P12235 298 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 ZNF41P51814 821 aaPredicted RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 ZNF121P58317 390 aaPredicted RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 MIDNQ504T8 468 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 OGFOD3Q6PK18 319 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 Q6ZS52 159 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 PGAP1Q75T13 922 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 KCNG3Q8TAE7 436 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 NEK7Q8TDX7 302 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 EDAQ92838 391 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 ZNF2Q9BSG1 426 aaPredicted RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 RBM24Q9BX46 236 aaKnown RBP11.3□□□□□ -0.6
VPS52-218ENST00000482399 RAB33BQ9H082 229 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 SLC17A5Q9NRA2 495 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 SLC5A6Q9Y289 635 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 IGLV1-36A0A0B4J1U3 117 aa11.3□□□□□ -0.6
VPS52-218ENST00000482399 A6NCN8 305 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms