RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TAF13Q15543 124 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 TMEM128Q5BJH2 165 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 PEAR1Q5VY43 1037 aaPredicted RBP11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 PMS2CLQ68D20 193 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 PTCRAQ6ISU1 281 aaPredicted RBP11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 CRIP3Q6Q6R5 217 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 ABHD12BQ7Z5M8 362 aaPredicted RBP11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 TMEM123Q8N131 208 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 STPG2Q8N412 459 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 GVQW1Q8N7I0 195 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 GALNT11Q8NCW6 608 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 GJC3Q8NFK1 279 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 COQ8AQ8NI60 647 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 STOML3Q8TAV4 291 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 PAQR8Q8TEZ7 354 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 PP6455Q8WZ26 134 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 CMBLQ96DG6 245 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 TM2D1Q9BX74 207 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 TMEM59Q9BXS4 323 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 NELFAQ9H3P2 528 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 SEC61A2Q9H9S3 476 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 FN3KRPQ9HA64 309 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 PILRBQ9UKJ0 227 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 SPEF1Q9Y4P9 236 aa11.04□□□□□ -0.64
ECHDC1-209ENST00000454591 IGKV1-9A0A0C4DH69 117 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 KANTRA0A1W2PQU2 76 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 NTN3O00634 580 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 RLN2P04090 185 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 LIFP15018 202 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 ABOP16442 354 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 FPR2P25090 351 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 CDAP32320 146 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 DSCR4P56555 118 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 NAAAQ02083 359 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 ENDOGQ14249 297 aaKnown RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 SURF2Q15527 256 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 NKPD1Q17RQ9 610 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 TMEM176BQ3YBM2 270 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 PLAC9Q5JTB6 97 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 OR52W1Q6IF63 320 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 CD163Q86VB7 1156 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 WDR5BQ86VZ2 330 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 SPERTQ8NA61 448 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 PXT1Q8NFP0 134 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 OR4K15Q8NH41 348 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 PPP1R1CQ8WVI7 109 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 NABP1Q96AH0 204 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 RAB3CQ96E17 227 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 CCDC120Q96HB5 630 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 LINC00052Q96N35 136 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 DMRTA2Q96SC8 542 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 GAL3ST1Q99999 423 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 NICN1Q9BSH3 213 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 PROK2Q9HC23 129 aa11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 MYEF2Q9P2K5 600 aaKnown RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF230Q9UIE0 474 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 FOXD3Q9UJU5 478 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-209ENST00000454591 UNC80Q8N2C7 3258 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 F8VVB4 439 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 F8VWA3 439 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 RER1O15258 196 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 RAMP1O60894 148 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 CRHP06850 196 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 CSNK1A1P48729 337 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 PRKXP51817 358 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 INPP5JQ15735 1006 aaPredicted RBP11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 MICBQ29980 383 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 TFAP2EQ6VUC0 442 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 C17orf107Q6ZR85 190 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 SLC38A6Q8IZM9 456 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 ZNF283Q8N7M2 679 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 TMEM104Q8NE00 496 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 ST8SIA4Q92187 359 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 HLA-CQ95604 372 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 NKD1Q969G9 470 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 TMEM41AQ96HV5 264 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 ZNF416Q9BWM5 594 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 WDR13Q9H1Z4 485 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 GAREM1Q9H706 876 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 RAB18Q9NP72 206 aa11.02□□□□□ -0.65
ECHDC1-209ENST00000454591 TEX13DA0A0J9YY54 714 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 SERPINE3A8MV23 424 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 SOCS1O15524 211 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 DHRS3O75911 302 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 SFT2D2O95562 160 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 MPIG6BO95866 241 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 UMODP07911 640 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 CD63P08962 238 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 COX6A1P12074 109 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 ECI1P42126 302 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 OR3A4PP47883 348 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 CLDN17P56750 224 aa11.01□□□□□ -0.65
ECHDC1-209ENST00000454591 TAS2R46P59540 309 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms