RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SCMH1Q96GD3 660 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 DEFB127Q9H1M4 99 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 CYSLTR2Q9NS75 346 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 DDX60LQ5H9U9 1706 aaKnown RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 ARG1P05089 322 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ZNF250P15622 560 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TCN2P20062 427 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 USF1P22415 310 aaPredicted RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 RFC3P40938 356 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 PPP1R1AQ13522 171 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 CALHM3Q86XJ0 350 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 DEFB108BQ8NET1 73 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 RTN4IP1Q8WWV3 396 aaPredicted RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 RGP1Q92546 391 aaPredicted RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 IL22RA2Q969J5 263 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ST6GAL2Q96JF0 529 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TRAPPC4Q9Y296 219 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ARRDC5A6NEK1 342 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 METTL12A8MUP2 240 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 H3BMH7 237 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 ABCD4O14678 606 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 FAHP16930 419 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 LYPD8Q6UX82 237 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 SYS1Q8N2H4 156 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 C20orf141Q9NUB4 165 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 MEOX2P50222 304 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 SLC37A1P57057 533 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 YPEL5P62699 121 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 B3GNTL1Q67FW5 361 aaPredicted RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 VASH2Q86V25 355 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 SLC35E1Q96K37 410 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 RTL8AQ9BWD3 113 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 B3GAT1Q9P2W7 334 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 ZNF835Q9Y2P0 537 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 LRP12Q9Y561 859 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 PRRT4C9JH25 899 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 K7EQM0 130 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 MYF5P13349 255 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 HMGA1P17096 107 aaKnown RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 CDK5Q00535 292 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 TOMM34Q15785 309 aaPredicted RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 OR52N5Q8NH56 324 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 ST3GAL6Q9Y274 331 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 BTBD17A6NE02 478 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 TERTO14746 1132 aaKnown RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 SIGLEC5O15389 551 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 SIGLEC14Q08ET2 396 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 EMC4Q5J8M3 183 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 SPATA46Q5T0L3 261 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 THEM4Q5T1C6 240 aa10.87□□□□□ -0.67
UBR4-205ENST00000417040 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 SIRT3Q9NTG7 399 aaPredicted RBP10.87□□□□□ -0.67
UBR4-205ENST00000417040 OR5K3A6NET4 321 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 SPINK2P20155 84 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 GPM6AP51674 278 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 LBX1P52954 281 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 UBE3DQ7Z6J8 389 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 FBXL6Q8N531 539 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 CRYBG1Q9Y4K1 1723 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 KIR2DS1A0A191URI9 304 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 SH2D1BO14796 132 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 NDUFB6O95139 128 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 KIR2DS4P43632 304 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 TIAL1Q01085 375 aaKnown RBP eCLIP10.86□□□□□ -0.677e-6■■□□□ 11.9
UBR4-205ENST00000417040 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 RNASEKQ6P5S7 137 aaKnown RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 CNRIP1Q96F85 164 aaPredicted RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 THAP10Q9P2Z0 257 aaPredicted RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 OR5V1Q9UGF6 321 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 MMACHCQ9Y4U1 282 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 A0A1B0GX78 115 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 KCNAB3O43448 404 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 TSPAN12O95859 305 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 CXCL3P19876 107 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 RPL29P47914 159 aaKnown RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 CDC20BQ86Y33 519 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 OR10G3Q8NGC4 313 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 HGDQ93099 445 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 FBXO17Q96EF6 278 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 C6orf106Q9H6K1 298 aaPredicted RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 KIF13AQ9H1H9 1805 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 CLEC18AA5D8T8 446 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 NKX6-3A6NJ46 265 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 ADPRHP54922 357 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 B4GALNT1Q00973 533 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 GVQW1Q8N7I0 195 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 CLEC18CQ8NCF0 446 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 VN1R1Q9GZP7 353 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 BARX1Q9HBU1 254 aaPredicted RBP10.86□□□□□ -0.67
UBR4-205ENST00000417040 PLCH1Q4KWH8 1693 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 TLCD2A6NGC4 264 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 CRYM-AS1A6NIL9 109 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 YIF1AO95070 293 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 CXCL12P48061 93 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 RAB32Q13637 225 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
UBR4-205ENST00000417040 AMER3Q8N944 861 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms