RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 RNF7Q9UBF6 113 aa14.79□□□□□ -0.04
LSM5-204ENST00000409909 CCDC182A6NF36 153 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 ANKRD30BLA7E2S9 258 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 G3V2T6 193 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 PRKYO43930 277 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 GRPP07492 148 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 ALOX5APP20292 161 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 CD80P33681 288 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 GSK3AP49840 483 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 ESRRGP62508 458 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 PAX8Q06710 450 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 GFOD2Q3B7J2 385 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 KLF17Q5JT82 389 aaPredicted RBP14.78□□□□□ -0.04
LSM5-204ENST00000409909 C1orf146Q5VVC0 180 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 LRRN1Q6UXK5 716 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 ZNF826PQ6ZT77 177 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 AMIGO2Q86SJ2 522 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.78□□□□□ -0.04
LSM5-204ENST00000409909 SPERTQ8NA61 448 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 ZNF418Q8TF45 676 aaPredicted RBP14.78□□□□□ -0.04
LSM5-204ENST00000409909 DACT3Q96B18 629 aaPredicted RBP14.78□□□□□ -0.04
LSM5-204ENST00000409909 DUS3LQ96G46 650 aaKnown RBP14.78□□□□□ -0.04
LSM5-204ENST00000409909 PGAM5Q96HS1 289 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 SLC6A7Q99884 636 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 OR10A2Q9H208 303 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 MMADHCQ9H3L0 296 aaPredicted RBP14.78□□□□□ -0.04
LSM5-204ENST00000409909 C1orf123Q9NWV4 160 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 OR5V1Q9UGF6 321 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 AP4S1Q9Y587 144 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 AUP1Q9Y679 476 aa14.78□□□□□ -0.04
LSM5-204ENST00000409909 M0R129 80 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 PITPNBP48739 271 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 HILS1P60008 231 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 GNB2P62879 340 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 EFNB1P98172 346 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 SFRP4Q6FHJ7 346 aaPredicted RBP14.77□□□□□ -0.05
LSM5-204ENST00000409909 ZNF841Q6ZN19 808 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 DCDC5Q6ZRR9 648 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 USP43Q70EL4 1123 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 BCDIN3DQ7Z5W3 292 aaKnown RBP14.77□□□□□ -0.05
LSM5-204ENST00000409909 WDR86Q86TI4 376 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 C11orf53Q8IXP5 236 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.77□□□□□ -0.05
LSM5-204ENST00000409909 BOLLQ8N9W6 283 aaKnown RBP14.77□□□□□ -0.05
LSM5-204ENST00000409909 C22orf15Q8WYQ4 148 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 LYZL4Q96KX0 146 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 KRT84Q9NSB2 600 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 RHBDD3Q9Y3P4 386 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 LRP12Q9Y561 859 aa14.77□□□□□ -0.05
LSM5-204ENST00000409909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.76□□□□□ -0.05
LSM5-204ENST00000409909 PRR32B1ATL7 298 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 C3orf80F5H4A9 247 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 TNFRSF13BO14836 293 aaPredicted RBP14.76□□□□□ -0.05
LSM5-204ENST00000409909 MRPL3P09001 348 aaKnown RBP14.76□□□□□ -0.05
LSM5-204ENST00000409909 FASP25445 335 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 PSMB10P40306 273 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 OR8B8Q15620 311 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 KDM4DQ6B0I6 523 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 OR8B3Q8NGG8 313 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 LRTOMTQ8WZ04 291 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 OR8B2Q96RD0 313 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 YIPF3Q9GZM5 350 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 GABARAPL1Q9H0R8 117 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 C14orf119Q9NWQ9 140 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 LAMP5Q9UJQ1 280 aa14.76□□□□□ -0.05
LSM5-204ENST00000409909 IGHV2-70DA0A0C4DH43 119 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 A6NLC8 198 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 LGALS8O00214 317 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 PSMD9O00233 223 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 LHBP01229 141 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 CFL1P23528 166 aaKnown RBP14.75□□□□□ -0.05
LSM5-204ENST00000409909 ACKR3P25106 362 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 PSMA6P60900 246 aaKnown RBP14.75□□□□□ -0.05
LSM5-204ENST00000409909 TUSC1Q2TAM9 212 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 SLX4IPQ5VYV7 408 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 WDR25Q64LD2 544 aaPredicted RBP14.75□□□□□ -0.05
LSM5-204ENST00000409909 NLRC3Q7RTR2 1065 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 KRT77Q7Z794 578 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 GCSAMQ8N6F7 178 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 OR8B12Q8NGG6 310 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 OR8S1Q8NH09 359 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 RAB40AQ8WXH6 277 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 MRI1Q9BV20 369 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 RGCCQ9H4X1 137 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 CTSZQ9UBR2 303 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 COPS3Q9UNS2 423 aa14.75□□□□□ -0.05
LSM5-204ENST00000409909 ZAR1LA6NP61 321 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 EGR1P18146 543 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 CSNK2BP67870 215 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 MZT1Q08AG7 82 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 ARMCX4Q5H9R4 360 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 C12orf73Q69YU5 71 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 ASRGL1Q7L266 308 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 ZDHHC13Q8IUH4 622 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 BPIFB2Q8N4F0 458 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 TCEANCQ8N8B7 351 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 CSNK2A3Q8NEV1 391 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 OR1M1Q8NGA1 313 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 ZFAND2BQ8WV99 257 aa14.74□□□□□ -0.05
LSM5-204ENST00000409909 ITPKCQ96DU7 683 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms