RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PPP1R36Q96LQ0 422 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CATSPER2Q96P56 530 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 PANX1Q96RD7 426 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SERPINI1Q99574 410 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 ATP5SQ99766 215 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMEM246Q9BRR3 403 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 RACGAP1Q9H0H5 632 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SIAEQ9HAT2 523 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CRLF2Q9HC73 371 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 TNFRSF19Q9NS68 423 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 MRPL22Q9NWU5 206 aaKnown RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 QPCTLQ9NXS2 382 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CDH10Q9Y6N8 788 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 A0A0B4J2A0 478 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 IGKV3D-20A0A0C4DH25 116 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZFP92A6NM28 416 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 SYCE1LA8MT33 242 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PSMD12O00232 456 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PHOX2AO14813 284 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 RAB29O14966 203 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 UBDO15205 165 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PFDN6O15212 129 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 EEDO75530 441 aaKnown RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 MMP23AO75900 390 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 SRP72O76094 671 aaKnown RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CDK14O94921 469 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ALDOBP05062 364 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ERCC1P07992 297 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CT62P0C5K7 136 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR8G3PP0DMU2 310 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCL5P13501 91 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ME2P23368 584 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 GTF2E2P29084 291 aaKnown RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 FMO3P31513 532 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 NSG1P42857 185 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PSMD8P48556 350 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CX3CR1P49238 355 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 TTPAP49638 278 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ERFP50548 548 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 C1QTNF8P60827 252 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ATP6V0D1P61421 351 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 NAA20P61599 178 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 XIAPP98170 497 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 TGFBR3Q03167 851 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 RAD51Q06609 339 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 TWF1Q12792 350 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 MAPRE2Q15555 327 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PPM1LQ5SGD2 360 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CLEC6AQ6EIG7 209 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 C22orf42Q6IC83 251 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 TMEM53Q6P2H8 277 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 TTC23LQ6PF05 361 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CLEC2AQ6UVW9 174 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CYHR1Q6ZMK1 362 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 GLT6D1Q7Z4J2 308 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 OFCC1Q8IZS5 231 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 MS4A15Q8N5U1 240 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF740Q8NDX6 193 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 VN1R2Q8NFZ6 395 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR1N2Q8NGR9 330 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 STAG3L4Q8TBR4 150 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 C7orf33Q8WU49 177 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PIH1D2Q8WWB5 315 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 PYDC1Q8WXC3 89 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCDC124Q96CT7 223 aaKnown RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 RCN3Q96D15 328 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 BIRC8Q96P09 236 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ECSITQ9BQ95 431 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 HES7Q9BYE0 225 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 DERL2Q9GZP9 239 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 DNTTIP1Q9H147 329 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 VCX3BQ9H321 246 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 RNF167Q9H6Y7 350 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 ANKRA2Q9H9E1 313 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 MRPL40Q9NQ50 206 aaKnown RBP3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 TAS2R13Q9NYV9 303 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 CALYQ9NYX4 217 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 IL17CQ9P0M4 197 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 SHPKQ9UHJ6 478 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 FIS1Q9Y3D6 152 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR51B4Q9Y5P0 310 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 DNAJC15Q9Y5T4 150 aa3.46□□□□□ -1.86
HMGB3P18-201ENST00000406327 THSD7BQ9C0I4 1608 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CITO14578 2027 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CXorf51AA0A1B0GTR3 108 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CYSRT1A8MQ03 144 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SUPT3HB4E1H0 165 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 C12orf77C9JDV5 145 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 K7ERQ8 282 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 AZIN1O14977 448 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 PPP1R2P9O14990 202 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR1I1O60431 355 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SUPT3HO75486 399 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 ANXA5P08758 320 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms