RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 IFNA6P05013 189 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 RFC3P40938 356 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 GLIPR1L1Q6UWM5 242 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 SLC25A45Q8N413 288 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 SLC30A7Q8NEW0 376 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 RNF141Q8WVD5 230 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 EXPH5Q8NEV8 1989 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 TEX13DA0A0J9YY54 714 aaPredicted RBP18.26■□□□□ 0.51
CLK3-202ENST00000395066 TRBV11-1A0A0K0K1C0 115 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 C5orf63A6NC05 138 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 RER1O15258 196 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 DUS4LO95620 317 aaKnown RBP18.26■□□□□ 0.51
CLK3-202ENST00000395066 FOSL2P15408 326 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 ZNF528Q3MIS6 628 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 PLAC9Q5JTB6 97 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 BAP18Q8IXM2 172 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 OR10R2Q8NGX6 335 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 ST8SIA1Q92185 356 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 DDIT4LQ96D03 193 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 CNTNAP3BQ96NU0 1288 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 BIN3Q9NQY0 253 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 FREM2Q5SZK8 3169 aa18.26■□□□□ 0.51
CLK3-202ENST00000395066 VSTM2BA6NLU5 285 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 F12P00748 615 aaPredicted RBP18.25■□□□□ 0.51
CLK3-202ENST00000395066 SERPINF1P36955 418 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 NPY4RP50391 375 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 AIMP2Q13155 320 aaKnown RBP18.25■□□□□ 0.51
CLK3-202ENST00000395066 OR5D18Q8NGL1 313 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 OR5D14Q8NGL3 314 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 OR4K15Q8NH41 348 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 TMEM41AQ96HV5 264 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 USB1Q9BQ65 265 aaKnown RBP18.25■□□□□ 0.51
CLK3-202ENST00000395066 COA4Q9NYJ1 87 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 ASH2LQ9UBL3 628 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 SNAPINO95295 136 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 BPNT1O95861 308 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 APOBEC1P41238 236 aaKnown RBP18.25■□□□□ 0.51
CLK3-202ENST00000395066 RSPO4Q2I0M5 234 aaPredicted RBP18.25■□□□□ 0.51
CLK3-202ENST00000395066 NKAPLQ5M9Q1 402 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 DEGS2Q6QHC5 323 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 ANKRD37Q7Z713 158 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 NPRL2Q8WTW4 380 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 MAFIPQ8WZ33 124 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 TREM1Q9NP99 234 aa18.25■□□□□ 0.51
CLK3-202ENST00000395066 A0A0B4J2A0 478 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 RAD51DO75771 328 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 ZNF20P17024 532 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 CLRN1P58418 232 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 NAAAQ02083 359 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 OR10G3Q8NGC4 313 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 OR8B12Q8NGG6 310 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 OR4A4PQ8NGN8 299 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 TMED6Q8WW62 240 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 LPAR5Q9H1C0 372 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 SHPKQ9UHJ6 478 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 NUDT19A8MXV4 375 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 LAP3P28838 519 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 SFTPDP35247 375 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 SLC9A3R2Q15599 337 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 C5orf46Q6UWT4 87 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 PGAP1Q75T13 922 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 PLPP5Q8NEB5 264 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 NFAM1Q8NET5 270 aaPredicted RBP18.24■□□□□ 0.51
CLK3-202ENST00000395066 POC1BQ8TC44 478 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 TMEM231Q9H6L2 316 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 GPR84Q9NQS5 396 aa18.24■□□□□ 0.51
CLK3-202ENST00000395066 DBX1A6NMT0 343 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 E9PLN8 166 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 ADAP1O75689 374 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 HEXBP07686 556 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 GIMD1P0DJR0 217 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 NPBWR1P48145 328 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 ZNF121P58317 390 aaPredicted RBP18.23■□□□□ 0.51
CLK3-202ENST00000395066 LILRB1Q8NHL6 650 aaPredicted RBP18.23■□□□□ 0.51
CLK3-202ENST00000395066 ELP5Q8TE02 316 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 MMP26Q9NRE1 261 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 PPP4R1LQ9P1A2 415 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 MRPS28Q9Y2Q9 187 aaKnown RBP18.23■□□□□ 0.51
CLK3-202ENST00000395066 TRBV6-7A0A0A0MS04 114 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 TMEM14DPA8MWL7 114 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 PNLIPRP3Q17RR3 467 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 OR5AS1Q8N127 324 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 RRNAD1Q96FB5 475 aaKnown RBP18.23■□□□□ 0.51
CLK3-202ENST00000395066 RNF126Q9BV68 326 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 MRPL13Q9BYD1 178 aaKnown RBP18.23■□□□□ 0.51
CLK3-202ENST00000395066 CYTL1Q9NRR1 136 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 MYO7BQ6PIF6 2116 aa18.23■□□□□ 0.51
CLK3-202ENST00000395066 PQLC2LA1A4F0 135 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 OR5B2Q96R09 309 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 SEC11CQ9BY50 192 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 NMES1Q9C002 83 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 ZFP57Q9NU63 452 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 ALKBH4Q9NXW9 302 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 HCKP08631 526 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 ZNF17P17021 662 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 TMEM50BP56557 158 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 NAA40Q86UY6 237 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 MISPQ8IVT2 679 aa18.22■□□□□ 0.51
CLK3-202ENST00000395066 C1orf147Q96MC9 270 aaPredicted RBP18.22■□□□□ 0.51
CLK3-202ENST00000395066 UQCC1Q9NVA1 299 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms