RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CALHM2Q9HA72 323 aa6□□□□□ -1.45
UBR4-204ENST00000375254 KNL1Q8NG31 2342 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SSSCA1O60232 199 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SLC25A1P53007 311 aa6□□□□□ -1.45
UBR4-204ENST00000375254 OR8B3Q8NGG8 313 aa6□□□□□ -1.45
UBR4-204ENST00000375254 MEX3AA1L020 520 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 DSCR3O14972 297 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SMIM10L2AP0DMW4 78 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SMIM10L2BP0DMW5 78 aa6□□□□□ -1.45
UBR4-204ENST00000375254 MFAP5Q13361 173 aa6□□□□□ -1.45
UBR4-204ENST00000375254 ISXQ2M1V0 245 aa6□□□□□ -1.45
UBR4-204ENST00000375254 TMEM64Q6YI46 380 aa6□□□□□ -1.45
UBR4-204ENST00000375254 D2HGDHQ8N465 521 aa6□□□□□ -1.45
UBR4-204ENST00000375254 TINAGQ9UJW2 476 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CACNA1DQ01668 2161 aa6□□□□□ -1.45
UBR4-204ENST00000375254 RER1O15258 196 aa6□□□□□ -1.45
UBR4-204ENST00000375254 OR7C1O76099 320 aaPredicted RBP6□□□□□ -1.45
UBR4-204ENST00000375254 VIPR2P41587 438 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SNRPNP63162 240 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 FZD5Q13467 585 aa6□□□□□ -1.45
UBR4-204ENST00000375254 MRPL37Q9BZE1 423 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 STARD10Q9Y365 291 aa6□□□□□ -1.45
UBR4-204ENST00000375254 R4GMQ9 66 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CDIPTO14735 213 aa6□□□□□ -1.45
UBR4-204ENST00000375254 ERGP11308 486 aa6□□□□□ -1.45
UBR4-204ENST00000375254 LAG3P18627 525 aa6□□□□□ -1.45
UBR4-204ENST00000375254 LINC01559Q495D7 138 aa6□□□□□ -1.45
UBR4-204ENST00000375254 PARS2Q7L3T8 475 aaKnown RBP6□□□□□ -1.45
UBR4-204ENST00000375254 TCF23Q7RTU1 214 aa6□□□□□ -1.45
UBR4-204ENST00000375254 CALHM3Q86XJ0 350 aa6□□□□□ -1.45
UBR4-204ENST00000375254 TNFRSF13CQ96RJ3 184 aa6□□□□□ -1.45
UBR4-204ENST00000375254 PISDQ9UG56 409 aa6□□□□□ -1.45
UBR4-204ENST00000375254 IL36AQ9UHA7 158 aa6□□□□□ -1.45
UBR4-204ENST00000375254 C9J4A7 227 aa6□□□□□ -1.45
UBR4-204ENST00000375254 SLC25A17O43808 307 aa6□□□□□ -1.45
UBR4-204ENST00000375254 NID1P14543 1247 aa6□□□□□ -1.45
UBR4-204ENST00000375254 OR5AS1Q8N127 324 aa6□□□□□ -1.45
UBR4-204ENST00000375254 OR2C3Q8N628 320 aa6□□□□□ -1.45
UBR4-204ENST00000375254 MSCO60682 206 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 ADTRPQ96IZ2 230 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 PDCD1LG2Q9BQ51 273 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 ST20Q9HBF5 79 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 HEPACAM2A8MVW5 462 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 TSPAN6O43657 245 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 VENTXO95231 258 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 CXCL3P19876 107 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 AGFG1P52594 562 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 PHLDA2Q53GA4 152 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 TCTN3Q6NUS6 607 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 RTL8AQ9BWD3 113 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 TBL2Q9Y4P3 447 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 KLK3P07288 261 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 ELLP55199 621 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 AQP10Q96PS8 301 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 WNT5BQ9H1J7 359 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 WDR13Q9H1Z4 485 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 HEYLQ9NQ87 328 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 TMEM30AQ9NV96 361 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 LAMTOR2Q9Y2Q5 125 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 IQSEC2Q5JU85 1478 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 GALR3O60755 368 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 CXorf1O96002 111 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 DANCRP0C864 163 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 RPS20P60866 119 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 DUSP8Q13202 625 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 HIST1H2BAQ96A08 127 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 ISG20Q96AZ6 181 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 NMNAT3Q96T66 252 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 PRTFDC1Q9NRG1 225 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 SPATA31A5Q5VU36 1347 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 SPATA31A7Q8IWB4 1347 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 FAM171A2A8MVW0 826 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 CLDN15P56746 228 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 RPS26P62854 115 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 Q5PR19 223 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 MRPL21Q7Z2W9 205 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 GLRX5Q86SX6 157 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 HS3ST3A1Q9Y663 406 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 BICRAQ9NZM4 1560 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 GINS3Q9BRX5 216 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 RNF167Q9H6Y7 350 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 SPINT2O43291 252 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 GYPAP02724 150 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 TMIGD3P0DMS9 266 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 NRLP54845 237 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 CXCL9Q07325 125 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 IRF3Q14653 427 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 FAM71E1Q6IPT2 247 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 COA4Q9NYJ1 87 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 FCF1Q9Y324 198 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 RCC1P18754 421 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 AVPR2P30518 371 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 SMAD4Q13485 552 aaKnown RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 FAM78BQ5VT40 261 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 SUSD3Q96L08 255 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 GPR84Q9NQS5 396 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 KDM4EB2RXH2 506 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 SOD2P04179 222 aa5.99□□□□□ -1.45
UBR4-204ENST00000375254 KLF9Q13886 244 aaPredicted RBP5.99□□□□□ -1.45
UBR4-204ENST00000375254 SSX1Q16384 188 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms