RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MOB1AQ9H8S9 216 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 TMEM138Q9NPI0 162 aa13.68□□□□□ -0.22
CCDC40-202ENST00000374876 KLF13Q9Y2Y9 288 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-202ENST00000374876 A0A087WZY1 265 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 KLRC4-KLRK1H3BQV0 150 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 RAMP1O60894 148 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 NOS1APO75052 506 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-202ENST00000374876 RAB6AP20340 208 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 CNR1P21554 472 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 RAP2BP61225 183 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 SLC25A47Q6Q0C1 308 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 TMEM229BQ8NBD8 167 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 OR1M1Q8NGA1 313 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 CPT1CQ8TCG5 803 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 ADAT3Q96EY9 351 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-202ENST00000374876 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 EXO5Q9H790 373 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 HEXA-AS1Q9H8Q6 139 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 CNTD2Q9H8S5 307 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 ZMAT3Q9HA38 289 aaKnown RBP13.67□□□□□ -0.22
CCDC40-202ENST00000374876 ASH2LQ9UBL3 628 aa13.67□□□□□ -0.22
CCDC40-202ENST00000374876 RAB3DO95716 219 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 CYB5AP00167 134 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 QDPRP09417 244 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 TLE1Q04724 770 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF239Q16600 458 aaKnown RBP13.66□□□□□ -0.22
CCDC40-202ENST00000374876 HYAL4Q2M3T9 481 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 RNFT1Q5M7Z0 435 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 THOC7Q6I9Y2 204 aaKnown RBP13.66□□□□□ -0.22
CCDC40-202ENST00000374876 TMPPEQ6ZT21 453 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 COMMD2Q86X83 199 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 GTPBP8Q8N3Z3 284 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-202ENST00000374876 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 ACBD4Q8NC06 268 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 OR2M7Q8NG81 312 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 OR1J2Q8NGS2 313 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 OR51E1Q8TCB6 317 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 DPCDQ9BVM2 203 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-202ENST00000374876 B3GNT2Q9NY97 397 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 PIPOXQ9P0Z9 390 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 UPB1Q9UBR1 384 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 RAB22AQ9UL26 194 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 LOC102725191A0A1B0GVB3 256 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 ZNF20P17024 532 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 RAB3AP20336 220 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 PRKXP51817 358 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 MOGAT2Q3SYC2 334 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 RAB12Q6IQ22 244 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 RHOUQ7L0Q8 258 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 CHMP1BQ7LBR1 199 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 OR8H3Q8N146 312 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 OR52N4Q8NGI2 321 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 OR13C9Q8NGT0 318 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 RHBDD3Q9Y3P4 386 aa13.66□□□□□ -0.22
CCDC40-202ENST00000374876 SLC22A5O76082 557 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 OR2A4O95047 310 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 KLK2P20151 261 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 CLDN17P56750 224 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 IGFBP7Q16270 282 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 HIST3H3Q16695 136 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 C4orf46Q504U0 113 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 TMEM81Q6P7N7 255 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 FAM180AQ6UWF9 173 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 UXS1Q8NBZ7 420 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 JSRP1Q96MG2 331 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-202ENST00000374876 OR2A7Q96R45 310 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 UQCC2Q9BRT2 126 aa13.65□□□□□ -0.22
CCDC40-202ENST00000374876 TMEM235A6NFC5 223 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ZNF736B4DX44 427 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-202ENST00000374876 M0QYG6 137 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 PMS2P2O95744 297 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 BPNT1O95861 308 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 IFNA7P01567 189 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ERCC1P07992 297 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-202ENST00000374876 NR2C1P13056 603 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 C4BPBP20851 252 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 RAET1LQ5VY80 246 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 IDO2Q6ZQW0 420 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ABHD12BQ7Z5M8 362 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-202ENST00000374876 FAM109AQ8N4B1 249 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 FAM46BQ96A09 425 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 GNRHR2Q96P88 292 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 FAM173AQ9BQD7 235 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ANGPTL4Q9BY76 406 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ZNF107Q9UII5 783 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-202ENST00000374876 SVILO95425 2214 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 A0A1B0GTI1 187 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 OR2M5A3KFT3 312 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 M0R233 179 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 RER1O15258 196 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 AMY2AP04746 511 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 SLC2A1P11166 492 aa13.64□□□□□ -0.23
CCDC40-202ENST00000374876 GUCA1AP43080 201 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-202ENST00000374876 ZNF121P58317 390 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-202ENST00000374876 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms