RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-202ENST00000374426 TSPAN9O75954 239 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-202ENST00000374426 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 MICBQ29980 383 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 WDR38Q5JTN6 314 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 DHRS7BQ6IAN0 325 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-202ENST00000374426 METAP1DQ6UB28 335 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-202ENST00000374426 ZDHHC21Q8IVQ6 265 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 RNF148Q8N7C7 305 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 PROKR2Q8NFJ6 384 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 OR51L1Q8NGJ5 315 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 FAM110DQ8TAY7 271 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-202ENST00000374426 LRRC29Q8WV35 223 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 SPSB4Q96A44 273 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 SEH1LQ96EE3 360 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 PYURFQ96I23 114 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 CCDC134Q9H6E4 229 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 OPA3Q9H6K4 179 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 EGLN3Q9H6Z9 239 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 GORASP2Q9H8Y8 452 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 RNPEPL1Q9HAU8 725 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 SPAG4Q9NPE6 437 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 ONECUT1Q9UBC0 465 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
CXCL12-202ENST00000374426 CCDC22O60826 627 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 FBP1P09467 338 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-202ENST00000374426 AMY2BP19961 511 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 DDOSTP39656 456 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 DLX1P56177 255 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 CSNK2BP67870 215 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 TSPAN31Q12999 210 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 C2orf68Q2NKX9 166 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 PGBD2Q6P3X8 592 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 WDR82Q6UXN9 313 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 FAM216BQ8N7L0 139 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 OR4C15Q8NGM1 316 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 OR2T4Q8NH00 348 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 OR8S1Q8NH09 359 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 NPRL2Q8WTW4 380 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 SLAMF6Q96DU3 332 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 PPP1R3EQ9H7J1 279 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 ARGLU1Q9NWB6 273 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-202ENST00000374426 N6AMT1Q9Y5N5 214 aa11.32□□□□□ -0.6
CXCL12-202ENST00000374426 ZNF816-ZNF321PA0A0X1KG74 233 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 BTBD17A6NE02 478 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 ANKRD30BLA7E2S9 258 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 RNASEK-C17orf49H0YIS7 233 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 ACOT8O14734 319 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 XRCC2O43543 280 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 SPARCP09486 303 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 RRM2P31350 389 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 GRK5P34947 590 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 IFNGR2P38484 337 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 FAM3AP98173 230 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 EGR3Q06889 387 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 SLC36A1Q7Z2H8 476 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 DPY19L4Q7Z388 723 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 Q8N7P7 452 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 OR1M1Q8NGA1 313 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 OR9Q1Q8NGQ5 310 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 GNPDA2Q8TDQ7 276 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 DMRTB1Q96MA1 342 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 CENPMQ9NSP4 180 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 DNAJB11Q9UBS4 358 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 PRPF19Q9UMS4 504 aaKnown RBP11.31□□□□□ -0.6
CXCL12-202ENST00000374426 CAB39Q9Y376 341 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-202ENST00000374426 CDH10Q9Y6N8 788 aa11.31□□□□□ -0.6
CXCL12-202ENST00000374426 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 A0A1W2PRD5 423 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 A0A1W2PRF3 423 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 A0A1W2PRM7 423 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 ZNF878C9JN71 531 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 NPFFO15130 113 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 GMNNO75496 209 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 SELLP14151 372 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 TGFBR2P37173 567 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 TGM4P49221 684 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 ENTPD1P49961 510 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 KLRD1Q13241 179 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 IKZF1Q13422 519 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 TAF13Q15543 124 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 STUMQ69YW2 141 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 CMTM4Q8IZR5 234 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 PNKDQ8N490 385 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 SLC37A3Q8NCC5 494 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 OR52L1Q8NGH7 329 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 OR8D4Q8NGM9 314 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 SGK3Q96BR1 496 aa11.3□□□□□ -0.6
CXCL12-202ENST00000374426 C12orf43Q96C57 262 aaKnown RBP11.3□□□□□ -0.6
CXCL12-202ENST00000374426 DCTN5Q9BTE1 182 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms