RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ITFG2Q969R8 447 aa23.27■■□□□ 1.32
SSBP4-202ENST00000348495 NOX4Q9NPH5 578 aa23.27■■□□□ 1.32
SSBP4-202ENST00000348495 RSL24D1Q9UHA3 163 aaKnown RBP23.27■■□□□ 1.32
SSBP4-202ENST00000348495 A0A1W2PPK0 400 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 LOXP28300 417 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-202ENST00000348495 GLRXP35754 106 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 TGFBR1P36897 503 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 ASPHD2Q6ICH7 369 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 PIAS4Q8N2W9 510 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-202ENST00000348495 PARP16Q8N5Y8 322 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 FAM222BQ8WU58 562 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 ADAT3Q96EY9 351 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-202ENST00000348495 GSTK1Q9Y2Q3 226 aa23.26■■□□□ 1.31
SSBP4-202ENST00000348495 CCDC160A6NGH7 325 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 CASKO14936 926 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 CD2P06729 351 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 VBP1P61758 197 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 SEMA6DQ8NFY4 1073 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 KLF14Q8TD94 323 aaPredicted RBP23.25■■□□□ 1.31
SSBP4-202ENST00000348495 FGGYQ96C11 551 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 C12orf43Q96C57 262 aaKnown RBP23.25■■□□□ 1.31
SSBP4-202ENST00000348495 RAC2P15153 192 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 TMEM171Q8WVE6 324 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 ORAI1Q96D31 301 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 RADILQ96JH8 1075 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 KCTD7Q96MP8 289 aa23.25■■□□□ 1.31
SSBP4-202ENST00000348495 SHISA9B4DS77 424 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 ARL6IP5O75915 188 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 CALRP27797 417 aaKnown RBP23.24■■□□□ 1.31
SSBP4-202ENST00000348495 MAP2K3P46734 347 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 MSMPQ1L6U9 139 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 MBNL2Q5VZF2 373 aaKnown RBP23.24■■□□□ 1.31
SSBP4-202ENST00000348495 SLC22A25Q6T423 547 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 KRT74Q7RTS7 529 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 C10orf35Q96D05 121 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 HAVCR1Q96D42 359 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 PIGLQ9Y2B2 252 aa23.24■■□□□ 1.31
SSBP4-202ENST00000348495 SHISA3A0PJX4 238 aa23.23■■□□□ 1.31
SSBP4-202ENST00000348495 NOL3O60936 208 aaKnown RBP23.23■■□□□ 1.31
SSBP4-202ENST00000348495 CD3EP07766 207 aa23.23■■□□□ 1.31
SSBP4-202ENST00000348495 TMEM255AQ5JRV8 349 aa23.23■■□□□ 1.31
SSBP4-202ENST00000348495 ADAM5Q6NVV9 412 aa23.23■■□□□ 1.31
SSBP4-202ENST00000348495 CMBLQ96DG6 245 aa23.23■■□□□ 1.31
SSBP4-202ENST00000348495 LRRK2Q5S007 2527 aa23.23■■□□□ 1.31
SSBP4-202ENST00000348495 TRIM64BA6NI03 449 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 A6NIN4 97 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 CD300LBA8K4G0 201 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 SLC22A1O15245 554 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 FAHP16930 419 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 MPV17P39210 176 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 RPS23P62266 143 aaKnown RBP23.22■■□□□ 1.31
SSBP4-202ENST00000348495 RIPPLY1Q0D2K3 151 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 PSG7Q13046 419 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 HSD17B12Q53GQ0 312 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 RGS7BPQ6MZT1 257 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-202ENST00000348495 OR56B2PQ8NGI1 322 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 ZNF250P15622 560 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 IGFBP3P17936 291 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-202ENST00000348495 FSTP19883 344 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 ZNF718Q3SXZ3 478 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 ZBTB37Q5TC79 503 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 SERPINA12Q8IW75 414 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 TMEM204Q9BSN7 226 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 PLEKHA1Q9HB21 404 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 CA10Q9NS85 328 aa23.22■■□□□ 1.31
SSBP4-202ENST00000348495 PLCE1Q9P212 2302 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 TRAV8-7A0A075B6U6 113 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 TRAV1-2A0A0B4J238 106 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 ANKRD61A6NGH8 418 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 GGT3PA6NGU5 568 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 ZNF20P17024 532 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 SRMP19623 302 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 THBS4P35443 961 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 DDOSTP39656 456 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 SPCS2Q15005 226 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 TMEM42Q69YG0 159 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 OR2T2Q6IF00 324 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 ZNF529Q6P280 563 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 NDNFQ8TB73 568 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 HS3ST6Q96QI5 342 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 ZNF442Q9H7R0 627 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 RNF115Q9Y4L5 304 aa23.21■■□□□ 1.31
SSBP4-202ENST00000348495 MEX3BQ6ZN04 569 aaKnown RBP23.2■■□□□ 1.3
SSBP4-202ENST00000348495 CSNK2A3Q8NEV1 391 aa23.2■■□□□ 1.3
SSBP4-202ENST00000348495 KBTBD8Q8NFY9 601 aa23.2■■□□□ 1.3
SSBP4-202ENST00000348495 TAS2R4Q9NYW5 299 aa23.2■■□□□ 1.3
SSBP4-202ENST00000348495 FOXJ3Q9UPW0 622 aa23.2■■□□□ 1.3
SSBP4-202ENST00000348495 KITLGP21583 273 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 MTNR1BP49286 362 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 FABP6P51161 128 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 DAZAP2Q15038 168 aaPredicted RBP23.19■■□□□ 1.3
SSBP4-202ENST00000348495 OR5D14Q8NGL3 314 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 PP6455Q8WZ26 134 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 PIK3IP1Q96FE7 263 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 CHST5Q9GZS9 411 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 ZNF816-ZNF321PA0A0X1KG74 233 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 PRSS44E7EML9 344 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 SDC2P34741 201 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 ALKBH6Q3KRA9 238 aa23.19■■□□□ 1.3
SSBP4-202ENST00000348495 UTS2BQ765I0 119 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms