RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ZNF665Q9H7R5 613 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 FN3KRPQ9HA64 309 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 ABCB9Q9NP78 766 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 PCDHB10Q9UN67 800 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 LOC100130705A0A1B0GUX0 176 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 ANXA2P2A6NMY6 339 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 ANKRD65E5RJM6 399 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 LOC110117498-PIK3R3F6TDL0 507 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 ENTPD6O75354 484 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 ANOS1P23352 680 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 GATA4P43694 442 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 BTG1P62324 171 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 BCL2L15Q5TBC7 163 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 GLCCI1Q86VQ1 547 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 GALNT4Q8N4A0 578 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 KLHL36Q8N4N3 616 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 RFLNBQ8N5W9 214 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 PACRGLQ8N7B6 248 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 YIPF7Q8N8F6 280 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 ITFG2Q969R8 447 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 MRPL48Q96GC5 212 aaKnown RBP16.2■□□□□ 0.18
SYNE4-202ENST00000340477 PBOV1Q9GZY1 135 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 VCXQ9H320 206 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 FAM206AQ9NX38 181 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 UBAP1Q9NZ09 502 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 LPAR3Q9UBY5 353 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 NUFIP1Q9UHK0 495 aaKnown RBP16.2■□□□□ 0.18
SYNE4-202ENST00000340477 PCDHGB1Q9Y5G3 927 aa16.2■□□□□ 0.18
SYNE4-202ENST00000340477 IGHV3-64DA0A0J9YX35 117 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 A0A0U1RQV5 110 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 ERICH4A6NGS2 130 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 APOL3O95236 402 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 MDH2P40926 338 aaKnown RBP16.19■□□□□ 0.18
SYNE4-202ENST00000340477 OR8B8Q15620 311 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 LRRC36Q1X8D7 754 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF181Q2M3W8 571 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 PLPP7Q8NBV4 271 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 OR51F2Q8NH61 342 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF420Q8TAQ5 688 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-202ENST00000340477 RNFT2Q96EX2 444 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 C1orf159Q96HA4 380 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 FAM118AQ9NWS6 357 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 TMEM160Q9NX00 188 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF319Q9P2F9 582 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 CDC42EP3Q9UKI2 254 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 SNX5Q9Y5X3 404 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 R4GMQ9 66 aa16.19■□□□□ 0.18
SYNE4-202ENST00000340477 NIPBLQ6KC79 2804 aaeCLIP16.19■□□□□ 0.18
SYNE4-202ENST00000340477 NF1P21359 2839 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 A0A1W2PQL4 384 aaPredicted RBP16.18■□□□□ 0.18
SYNE4-202ENST00000340477 A6NLC8 198 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 PRR32B1ATL7 298 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 TMEM178BH3BS89 294 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 WNT9BO14905 357 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 MTRF1O75570 445 aaKnown RBP16.18■□□□□ 0.18
SYNE4-202ENST00000340477 IGHV2-70P01814 119 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 MAP2K3P46734 347 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 IL5RAQ01344 420 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 MAB21L1Q13394 359 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 CHRFAM7AQ494W8 412 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 TMEM155Q4W5P6 130 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 PRAMEF6Q5VXH4 476 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 PLEKHG7Q6ZR37 379 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 THAP5Q7Z6K1 395 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 DVL3Q92997 716 aaPredicted RBP16.18■□□□□ 0.18
SYNE4-202ENST00000340477 UBE2FQ969M7 185 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 MICU1Q9BPX6 476 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 SOX7Q9BT81 388 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 SHARPINQ9H0F6 387 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 UFSP2Q9NUQ7 469 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 ZFHX3Q15911 3703 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 MALRD1Q5VYJ5 2156 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 SONP18583 2426 aaKnown RBP16.18■□□□□ 0.18
SYNE4-202ENST00000340477 ABCA2Q9BZC7 2435 aa16.18■□□□□ 0.18
SYNE4-202ENST00000340477 FN1P02751 2386 aaKnown RBP16.18■□□□□ 0.18
SYNE4-202ENST00000340477 METTL15A6NJ78 407 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 E9PQ18 207 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 SLC16A6O15403 523 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 CRLF1O75462 422 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 SULT1C4O75897 302 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 CYB5R3P00387 301 aaPredicted RBP16.17■□□□□ 0.18
SYNE4-202ENST00000340477 IGHV2-5P01817 119 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 MSMBP08118 114 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 ATP6V1B1P15313 513 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 PEX2P28328 305 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 DVL1P1P54792 670 aaPredicted RBP16.17■□□□□ 0.18
SYNE4-202ENST00000340477 LMO4P61968 165 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 ZNF771Q7L3S4 317 aaPredicted RBP16.17■□□□□ 0.18
SYNE4-202ENST00000340477 ENTHD1Q8IYW4 607 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 Q8TCH9 128 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 CYGBQ8WWM9 190 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 HIST1H2AAQ96QV6 131 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 SIGLEC11Q96RL6 698 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 RTL8AQ9BWD3 113 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 BEX2Q9BXY8 128 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 DCLRE1BQ9H816 532 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 LPAR2Q9HBW0 351 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 DCAF16Q9NXF7 216 aa16.17■□□□□ 0.18
SYNE4-202ENST00000340477 MRM2Q9UI43 246 aaKnown RBP16.17■□□□□ 0.18
SYNE4-202ENST00000340477 OR52A1Q9UKL2 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms