RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF674Q2M3X9 581 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TEX30Q5JUR7 227 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TMEM244Q5VVB8 128 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 ABHD12BQ7Z5M8 362 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SLC22A24Q8N4F4 322 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SLC37A2Q8TED4 501 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TOMM40LQ969M1 308 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-201ENST00000300527 GGACTQ9BVM4 153 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TGIF2Q9GZN2 237 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TOLLIPQ9H0E2 274 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TNFSF14O43557 240 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 PET100P0DJ07 73 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SERPINA2P20848 420 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 PEG10Q86TG7 708 aaKnown RBP13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TRAV36DV7A0A075B6V5 113 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 LDLRAD4O15165 306 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 FOXS1O43638 330 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 FBXW4P57775 412 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 C14orf28Q4W4Y0 310 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SLC26A1Q9H2B4 701 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 VSX1Q9NZR4 365 aaPredicted RBP13.04□□□□□ -0.32
COL6A2-201ENST00000300527 ASH2LQ9UBL3 628 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 MEMO1Q9Y316 297 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 IGKV1D-43A0A0B4J1Z2 117 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 PRAMEF26H0Y7S4 382 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 RAD51DO75771 328 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 AHSA1O95433 338 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 HKR1P10072 659 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 OR1D4P47884 311 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 SNU13P55769 128 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 POU3F1Q03052 451 aaPredicted RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 NFATC4Q14934 902 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 CARD17Q5XLA6 110 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 APCDD1LQ8NCL9 501 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 FAM213BQ8TBF2 198 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 THAP3Q8WTV1 239 aaPredicted RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 TSLPQ969D9 159 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 ERGIC1Q969X5 290 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 WRBO00258 174 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 NUDT21O43809 227 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 OR2C1O95371 312 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 CD5P06127 495 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 PLAC9Q5JTB6 97 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 PHF19Q5T6S3 580 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 BTNL8Q6UX41 500 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 OR51T1Q8NGJ9 327 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 OCSTAMPQ9BR26 566 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 TMEM59Q9BXS4 323 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 RAB18Q9NP72 206 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 G6PC2Q9NQR9 355 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 GPR132Q9UNW8 380 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 TDRD6O60522 2096 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 TMED7-TICAM2A0A0A6YYA0 188 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 H3BML4 177 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 IGHV2-70P01814 119 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 BGLAPP02818 100 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 SULT1A2P50226 295 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 P2RY4P51582 365 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 TOMM20Q15388 145 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 CHRFAM7AQ494W8 412 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 NKAIN3Q8N8D7 197 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 OR13G1Q8NGZ3 307 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 FNDC9Q8TBE3 224 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 ELSPBP1Q96BH3 223 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 REEP6Q96HR9 211 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 S1PR5Q9H228 398 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
COL6A2-201ENST00000300527 C14orf166Q9Y224 244 aaKnown RBP13.03□□□□□ -0.32
COL6A2-201ENST00000300527 DBX1A6NMT0 343 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 HGFACQ04756 655 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 PNLIPRP3Q17RR3 467 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 FAM180AQ6UWF9 173 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 AQP10Q96PS8 301 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.32
COL6A2-201ENST00000300527 A0A1B0GV90 55 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 IFNA17P01571 189 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL6A2-201ENST00000300527 JMJD7P0C870 316 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 GIMD1P0DJR0 217 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 AGAP20933 346 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 HSD11B1P28845 292 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 FOXL2P58012 376 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 FAHD2BQ6P2I3 314 aaPredicted RBP13.02□□□□□ -0.33
COL6A2-201ENST00000300527 C16orf47Q6ZP98 133 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms