RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TEP1Q99973 2627 aaKnown RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 TRAV8-7A0A075B6U6 113 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 LOC100289279A0A1B0GTE1 492 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 MBD3L4A6NDZ8 208 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 MBD3L3A6NE82 208 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 MBD3L5A6NJ08 208 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 P2RY10O00398 339 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 UBBP0CG47 229 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ADRA2CP18825 462 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ELK1P19419 428 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 SLC6A9P48067 706 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 MMP15P51511 669 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 PRKXP51817 358 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ART1P52961 327 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ARF1P84077 181 aaKnown RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 PLP2Q04941 152 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ASAH1Q13510 395 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 IL18Q14116 193 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ACSF3Q4G176 576 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 PYDC2Q56P42 97 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 TRIQKQ629K1 86 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 STEAP3Q658P3 488 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 Q6ZT83 130 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 LINGO2Q7L985 606 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 BTLAQ7Z6A9 289 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 RDH10Q8IZV5 341 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 Q8N402 240 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 C17orf78Q8N4C9 275 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 OR10AC1Q8NH08 325 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 MBD3L2Q8NHZ7 208 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 LGALS14Q8TCE9 139 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 HAVCR1Q96D42 359 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF837Q96EG3 531 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 SDHCQ99643 169 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 METTL17Q9H7H0 456 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-201ENST00000238688 OBP2BQ9NPH6 170 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 ABCB10Q9NRK6 738 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 V9GYS6 101 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 CSMD2Q7Z408 3487 aa11.5□□□□□ -0.57
SLIRP-201ENST00000238688 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 A0A1W2PPK0 400 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 PRRG2O14669 202 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 MAGEB3O15480 346 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 GSTZ1O43708 216 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-201ENST00000238688 CLDN14O95500 239 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 TGM6O95932 706 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 SLC2A2P11168 524 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-201ENST00000238688 IL7P13232 177 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 RAB6AP20340 208 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 TUBG1P23258 451 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 HTR2CP28335 458 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 HTR5AP47898 357 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 PSG4Q00888 419 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 GALK2Q01415 458 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 SSBP1Q04837 148 aaKnown RBP11.49□□□□□ -0.57
SLIRP-201ENST00000238688 RAB12Q6IQ22 244 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 COLCA1Q6ZS62 124 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 FAM57BQ71RH2 274 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 CD163Q86VB7 1156 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 SKA3Q8IX90 412 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 OR8H2Q8N162 312 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 UBE2J2Q8N2K1 259 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 C19orf18Q8NEA5 215 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 OR1M1Q8NGA1 313 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 OR51E1Q8TCB6 317 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 SPSB4Q96A44 273 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 GFI1Q99684 422 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 C7orf50Q9BRJ6 194 aaKnown RBP11.49□□□□□ -0.57
SLIRP-201ENST00000238688 C1QTNF5Q9BXJ0 243 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 WNT5BQ9H1J7 359 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 GPR84Q9NQS5 396 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 TUBG2Q9NRH3 451 aa11.49□□□□□ -0.57
SLIRP-201ENST00000238688 SMIM30A4D0T7 59 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 F5H5K5 113 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 ICMTO60725 284 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 BPNT1O95861 308 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 MAS1P04201 325 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 TPOP07202 933 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 OCMP0CE72 109 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-201ENST00000238688 TIMP3P35625 211 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 MAP2K3P46734 347 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 GSK3AP49840 483 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 P2RY6Q15077 328 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 ODF4Q2M2E3 257 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 MZT2BQ6NZ67 158 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 UNQ6126/PRO20091Q6UXV3 157 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 TFAP2EQ6VUC0 442 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 KRT74Q7RTS7 529 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 SSX8Q7RTT4 187 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 CDH24Q86UP0 819 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 COMMD2Q86X83 199 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 LYPD6Q86Y78 171 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 C1orf174Q8IYL3 243 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 OR1K1Q8NGR3 316 aa11.48□□□□□ -0.57
SLIRP-201ENST00000238688 OR1J2Q8NGS2 313 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms