RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 AKAP14Q86UN6 197 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 FAM109AQ8N4B1 249 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ZFP62Q8NB50 900 aaPredicted RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 TMEM178AQ8NBL3 297 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 BHLHE23Q8NDY6 225 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 TMEM104Q8NE00 496 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 CPEB3Q8NE35 698 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 OR4D10Q8NGI6 311 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 FCAMRQ8WWV6 532 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 INTS12Q96CB8 462 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 HAVCR1Q96D42 359 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 FYTTD1Q96QD9 318 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 TRIB1Q96RU8 372 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 NICN1Q9BSH3 213 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SF3B5Q9BWJ5 86 aaKnown RBP3.01□□□□□ -1.93
LIG4-205ENST00000614526 CACNG6Q9BXT2 260 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 OR10A4Q9H209 315 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 SLCO5A1Q9H2Y9 848 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 BOLA1Q9Y3E2 137 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 KCNMB2Q9Y691 235 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 ARID1AO14497 2285 aa3.01□□□□□ -1.93
LIG4-205ENST00000614526 IGKV1-9A0A0C4DH69 117 aa3□□□□□ -1.93
LIG4-205ENST00000614526 LOC100289279A0A1B0GTE1 492 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SLC22A20A6NK97 555 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ANGPTL7O43827 346 aa3□□□□□ -1.93
LIG4-205ENST00000614526 GLSO94925 669 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 PDGFAP04085 211 aa3□□□□□ -1.93
LIG4-205ENST00000614526 NR2C1P13056 603 aa3□□□□□ -1.93
LIG4-205ENST00000614526 IGFBP3P17936 291 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 CSRP1P21291 193 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 ACKR3P25106 362 aa3□□□□□ -1.93
LIG4-205ENST00000614526 HLA-DMAP28067 261 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MNDAP41218 407 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MMP15P51511 669 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MRPS34P82930 218 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 PITPNAQ00169 270 aa3□□□□□ -1.93
LIG4-205ENST00000614526 PMPCAQ10713 525 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CAMK2BQ13554 666 aa3□□□□□ -1.93
LIG4-205ENST00000614526 PCGF3Q3KNV8 242 aa3□□□□□ -1.93
LIG4-205ENST00000614526 AGAP6Q5VW22 663 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OLFML2AQ68BL7 652 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ZNF585AQ6P3V2 769 aa3□□□□□ -1.93
LIG4-205ENST00000614526 GLIPR1L1Q6UWM5 242 aa3□□□□□ -1.93
LIG4-205ENST00000614526 UXS1Q8NBZ7 420 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR4S1Q8NGB4 309 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR1F12Q8NHA8 337 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SETD6Q8TBK2 473 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CHAC2Q8WUX2 184 aa3□□□□□ -1.93
LIG4-205ENST00000614526 APH1AQ96BI3 265 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SGK3Q96BR1 496 aa3□□□□□ -1.93
LIG4-205ENST00000614526 WDYHV1Q96HA8 205 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MICU1Q9BPX6 476 aa3□□□□□ -1.93
LIG4-205ENST00000614526 RANGRFQ9HD47 186 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 TMEM138Q9NPI0 162 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ZNF71Q9NQZ8 489 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 DIABLOQ9NR28 239 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ZNF629Q9UEG4 869 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 ING4Q9UNL4 249 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ALG5Q9Y673 324 aa3□□□□□ -1.93
LIG4-205ENST00000614526 KIAA1549Q9HCM3 1950 aa3□□□□□ -1.93
LIG4-205ENST00000614526 TLN1Q9Y490 2541 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 CADP27708 2225 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ADGRG4Q8IZF6 3080 aa3□□□□□ -1.93
LIG4-205ENST00000614526 C5orf49A4QMS7 147 aa3□□□□□ -1.93
LIG4-205ENST00000614526 GGT3PA6NGU5 568 aa3□□□□□ -1.93
LIG4-205ENST00000614526 HSPB2A8KAH6 182 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CENPXA8MT69 81 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ZNF587BE7ETH6 402 aa3□□□□□ -1.93
LIG4-205ENST00000614526 M0QYG6 137 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SPRY1O43609 319 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 LYZL6O75951 148 aa3□□□□□ -1.93
LIG4-205ENST00000614526 FARS2O95363 451 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 ALDOBP05062 364 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ISG15P05161 165 aa3□□□□□ -1.93
LIG4-205ENST00000614526 YES1P07947 543 aa3□□□□□ -1.93
LIG4-205ENST00000614526 FCGR2AP12318 317 aa3□□□□□ -1.93
LIG4-205ENST00000614526 GNB3P16520 340 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SERPINA2P20848 420 aa3□□□□□ -1.93
LIG4-205ENST00000614526 IL32P24001 234 aa3□□□□□ -1.93
LIG4-205ENST00000614526 BTCP35070 178 aa3□□□□□ -1.93
LIG4-205ENST00000614526 RBMXP38159 391 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 SNU13P55769 128 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 GRB2P62993 217 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 GTF3C1Q12789 2109 aa3□□□□□ -1.93
LIG4-205ENST00000614526 HLXQ14774 488 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 UBE2V2Q15819 145 aa3□□□□□ -1.93
LIG4-205ENST00000614526 HSPB2Q16082 182 aa3□□□□□ -1.93
LIG4-205ENST00000614526 NKPD1Q17RQ9 610 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SPATA46Q5T0L3 261 aa3□□□□□ -1.93
LIG4-205ENST00000614526 BRICD5Q6PL45 260 aa3□□□□□ -1.93
LIG4-205ENST00000614526 GVQW1Q8N7I0 195 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR56B4Q8NH76 319 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CPT1CQ8TCG5 803 aa3□□□□□ -1.93
LIG4-205ENST00000614526 HAVCR2Q8TDQ0 301 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SMIM4Q8WVI0 70 aa3□□□□□ -1.93
LIG4-205ENST00000614526 NUDCD2Q8WVJ2 157 aa3□□□□□ -1.93
LIG4-205ENST00000614526 PIGCQ92535 297 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SPTSSAQ969W0 71 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SLC25A28Q96A46 364 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CCDC120Q96HB5 630 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms