RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CNN1P51911 297 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ATP1B3P54709 279 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PDE7AQ13946 482 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF79Q15937 498 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HLA-DRB5Q30154 266 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SBSNQ6UWP8 590 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 BPIFA4PQ86YQ2 179 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 CLEC18CQ8NCF0 446 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PTPMT1Q8WUK0 201 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NDRG1Q92597 394 aaKnown RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 WDR34Q96EX3 536 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 MISP3Q96FF7 219 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 DTX4Q9Y2E6 619 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 ZBTB42B2RXF5 422 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 RAB29O14966 203 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 MT-ATP6P00846 226 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NPY1RP25929 384 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HINT1P49773 126 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 OCIAD2Q56VL3 154 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PPTC7Q8NI37 304 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 VN1R17PQ8TDU5 208 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GALNT14Q96FL9 552 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 TRIB1Q96RU8 372 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NEU1Q99519 415 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PMELP40967 661 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 VASPP50552 380 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SYPL1Q16563 259 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 PDLIM3Q53GG5 364 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 LRRC18Q8N456 261 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HSPB9Q9BQS6 159 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SMOC1Q9H4F8 434 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SLC25A19Q9HC21 320 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HES4Q9HCC6 221 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 KCND3Q9UK17 655 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 NCKAP5O14513 1909 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 WASP42768 502 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 GPR18Q14330 331 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 OR11L1Q8NGX0 322 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SLC38A5Q8WUX1 472 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SELENOIQ9C0D9 397 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SEBOXQ9HB31 216 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SIRT5Q9NXA8 310 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 HHLA2Q9UM44 414 aa4.51□□□□□ -1.69
VPS13D-213ENST00000613099 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 HPXP02790 462 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 CD3DP04234 171 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 EEF1DP3Q658K8 133 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM269A0A1B0GVZ9 245 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 A0A1W2PNV4 684 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 DBHP09172 617 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 AGAP20933 346 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 RPS26P62854 115 aaKnown RBP4.5□□□□□ -1.69
VPS13D-213ENST00000613099 DPY19L2P2Q6ZN68 376 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM217Q8N7C4 229 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 C1orf127Q8N9H9 656 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 ABI3Q9P2A4 366 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF16P17020 682 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-213ENST00000613099 EXT1Q16394 746 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 FAM169BQ8N8A8 192 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 SLAMF6Q96DU3 332 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TEAD3Q99594 435 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 LTB4R2Q9NPC1 389 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 CLCF1Q9UBD9 225 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 FIGNL2A6NMB9 653 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 SEMA7AO75326 666 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 SQSTM1Q13501 440 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 PLEKHS1Q5SXH7 462 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 PRSS54Q6PEW0 395 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 CLEC18BQ6UXF7 455 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 RLN3Q8WXF3 142 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM131Q92545 1883 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 WDR83Q9BRX9 315 aaKnown RBP4.5□□□□□ -1.69
VPS13D-213ENST00000613099 UNC13CQ8NB66 2214 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 ANKRD66B4E2M5 251 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 OR1D2P34982 312 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TNFSF9P41273 254 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 CLDN12P56749 244 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TGFBR3Q03167 851 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 DMWDQ09019 674 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 MBOAT2Q6ZWT7 520 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 STXBP6Q8NFX7 210 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 PLD4Q96BZ4 506 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 A0A087WV62 115 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 IQCF5A8MTL0 148 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 ENSAO43768 121 aaKnown RBP4.5□□□□□ -1.69
VPS13D-213ENST00000613099 GNG7O60262 68 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 DOK2O60496 412 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 LAG3P18627 525 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 GGTA1PQ4G0N0 100 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TBC1D3FA6NER0 549 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-213ENST00000613099 NKX6-3A6NJ46 265 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 HSBP1O75506 76 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 SELLP14151 372 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 RIPPLY3P57055 190 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM220Q6QAJ8 160 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 SEH1LQ96EE3 360 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 JAM3Q9BX67 310 aa4.5□□□□□ -1.69
VPS13D-213ENST00000613099 CHST5Q9GZS9 411 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms