RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 H2BFSP57053 126 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 LILRA6Q6PI73 481 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 OR56B2PQ8NGI1 322 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 LILRB1Q8NHL6 650 aaPredicted RBP13.16□□□□□ -0.3
VPS36-207ENST00000611132 STT3BQ8TCJ2 826 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 TAAR8Q969N4 342 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 C2orf72A6NCS6 295 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 OR2W5A6NFC9 320 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 SEMA7AO75326 666 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ADAP1O75689 374 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ZNF141Q15928 474 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ATOH1Q92858 354 aaPredicted RBP13.16□□□□□ -0.3
VPS36-207ENST00000611132 PIK3IP1Q96FE7 263 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 LHX9Q9NQ69 397 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 C19orf12Q9NSK7 152 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ZNF107Q9UII5 783 aaPredicted RBP13.16□□□□□ -0.3
VPS36-207ENST00000611132 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 TGOLN2O43493 480 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ADRA2CP18825 462 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ADIRFQ15847 76 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 CLEC9AQ6UXN8 241 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 CDC20BQ86Y33 519 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 OR13H1Q8NG92 308 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
VPS36-207ENST00000611132 TOE1Q96GM8 510 aaKnown RBP13.16□□□□□ -0.3
VPS36-207ENST00000611132 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 RARRES3Q9UL19 164 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 LCTP09848 1927 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 TRBV11-1A0A0K0K1C0 115 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 A0A0U1RQK1 487 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 FIGNL2A6NMB9 653 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 AP4M1O00189 453 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 CYB5BO43169 146 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 IL33O95760 270 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 Q7L0L9 218 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 GJC3Q8NFK1 279 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 MITD1Q8WV92 249 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 SGK3Q96BR1 496 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 SRPK3Q9UPE1 567 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 MMP24Q9Y5R2 645 aa13.16□□□□□ -0.3
VPS36-207ENST00000611132 LOC102725191A0A1B0GVB3 256 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 HTRA3P83110 453 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 GGTLC2Q14390 218 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 ZAR1Q86SH2 424 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 MKXQ8IYA7 352 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 F10P00742 488 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 HOXC12P31275 282 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 OPRM1P35372 400 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 APOBEC1P41238 236 aaKnown RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 HBG1P69891 147 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 HBG2P69892 147 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 OR2T2Q6IF00 324 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 PIGQQ9BRB3 760 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 NMES1Q9C002 83 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 ABI3Q9P2A4 366 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 MRPS2Q9Y399 296 aaKnown RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 GJE1A6NN92 205 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 A8MXK9 166 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 JMJD7P0C870 316 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 CTGFP29279 349 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 PIGPP57054 158 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 LHX8Q68G74 356 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 IL1F10Q8WWZ1 152 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 OBP2AQ9NY56 170 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 TMEM184BQ9Y519 407 aaPredicted RBP13.15□□□□□ -0.3
VPS36-207ENST00000611132 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
VPS36-207ENST00000611132 ABCD4O14678 606 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 ZFAND5O76080 213 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 GLRX5Q86SX6 157 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 ZNF610Q8N9Z0 462 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 OPA3Q9H6K4 179 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
VPS36-207ENST00000611132 ICAM5Q9UMF0 924 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
VPS36-207ENST00000611132 SIP14410 1827 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 CYTIPO60759 359 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 CA3P07451 260 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
VPS36-207ENST00000611132 ENPP1P22413 925 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 AWAT1Q58HT5 328 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 MRPL21Q7Z2W9 205 aaKnown RBP13.14□□□□□ -0.31
VPS36-207ENST00000611132 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 OR10D4PQ8NGN7 298 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 WWTR1Q9GZV5 400 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
VPS36-207ENST00000611132 FBXL17Q9UF56 701 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms