RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 COQ7Q99807 217 aa11.2□□□□□ -0.62
CSNK1D-219ENST00000581660 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
CSNK1D-219ENST00000581660 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
CSNK1D-219ENST00000581660 NKX1-2Q9UD57 310 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-219ENST00000581660 PLECQ15149 4684 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 RER1O15258 196 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 GMDSO60547 372 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 MUC1P15941 1255 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 CA6P23280 308 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 PRSS12P56730 875 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 HIST1H3AP68431 136 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 POU4F2Q12837 409 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 WDR38Q5JTN6 314 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 HIST2H3PS2Q5TEC6 136 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 HIST2H3AQ71DI3 136 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 SLC36A1Q7Z2H8 476 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 FAM216BQ8N7L0 139 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 TMEM239Q8WW34 195 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 ACOT11Q8WXI4 607 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 CCL13Q99616 98 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 AURKCQ9UQB9 309 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 SH3GLB1Q9Y371 365 aa11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 SF3B6Q9Y3B4 125 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-219ENST00000581660 IGHV3OR15-7A0A075B7D8 119 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 A0A0G2JND7 137 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 TEX13CA0A0J9YWL9 993 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 H7C1C5 153 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 AHCYL1O43865 530 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 CTLA4P16410 223 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 OR1E2P47887 323 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 TGM4P49221 684 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 CTXN1P60606 82 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 LCN6P62502 163 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 VMACQ2NL98 169 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 ZNF826PQ6ZT77 177 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 PATL1Q86TB9 770 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 SDR9C7Q8NEX9 313 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 SLC26A7Q8TE54 656 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 SPRYD4Q8WW59 207 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 RABEP2Q9H5N1 569 aa11.18□□□□□ -0.62
CSNK1D-219ENST00000581660 HTR3EA5X5Y0 456 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 VGLL3A8MV65 326 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 FXYD1O00168 92 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 NDUFB3O43676 98 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 PEX14O75381 377 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 PAICSP22234 425 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 PIN1Q13526 163 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 CNN3Q15417 329 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 PCK2Q16822 640 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 MICBQ29980 383 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 LINC00482Q8N8I6 264 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 C12orf43Q96C57 262 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 CHID1Q9BWS9 393 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 POLR2J2Q9GZM3 115 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 POLR2J3Q9H1A7 115 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 MUC13Q9H3R2 512 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 MED31Q9Y3C7 131 aa11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-219ENST00000581660 CD300LBA8K4G0 201 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 EDF1O60869 148 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 OR5F1O95221 314 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 CLIC3O95833 236 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 ALDOBP05062 364 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 AMY2BP19961 511 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 PAX6P26367 422 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 TAS2R41P59536 307 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 FHL1Q13642 323 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 KCNMB1Q16558 191 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 LRRC10Q5BKY1 277 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 ATPAF1Q5TC12 328 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 OTPQ5XKR4 325 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 PGAP1Q75T13 922 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 GLB1L2Q8IW92 636 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 FAM156AQ8NDB6 213 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 OR5D13Q8NGL4 314 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 SLCO4A1Q96BD0 722 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 OR5M11Q96RB7 305 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 RNPEPL1Q9HAU8 725 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 MRPL15Q9P015 296 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 TSSC4Q9Y5U2 329 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-219ENST00000581660 hCG_1807616A0A1W2PRN6 198 aa11.15□□□□□ -0.62
CSNK1D-219ENST00000581660 PRSS37A4D1T9 235 aa11.15□□□□□ -0.62
CSNK1D-219ENST00000581660 A6NDX4 124 aa11.15□□□□□ -0.62
CSNK1D-219ENST00000581660 NKX6-3A6NJ46 265 aa11.15□□□□□ -0.62
CSNK1D-219ENST00000581660 A6NLC8 198 aa11.15□□□□□ -0.62
CSNK1D-219ENST00000581660 ACOT8O14734 319 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms