RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 FAM20BO75063 409 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 PRR23D2P0DMB1 279 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 OTX1P32242 354 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 PMELP40967 661 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 CD200P41217 278 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 GNB2P62879 340 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 GRB2P62993 217 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 CDK5Q00535 292 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF154Q13106 437 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 MPPED2Q15777 294 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 PCK2Q16822 640 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 TIGD6Q17RP2 521 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF181Q2M3W8 571 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 GFOD2Q3B7J2 385 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 KLHL12Q53G59 568 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 TEX30Q5JUR7 227 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 PLBD1Q6P4A8 553 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 FAHD1Q6P587 224 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 KLBQ86Z14 1044 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 BOLLQ8N9W6 283 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 C19orf18Q8NEA5 215 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 BBS1Q8NFJ9 593 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 LRTOMTQ8WZ04 291 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 NRBF2Q96F24 287 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 TMEM246Q9BRR3 403 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 SSBP3Q9BWW4 388 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 SUCNR1Q9BXA5 334 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 FN3KRPQ9HA64 309 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 BRD7Q9NPI1 651 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 PAPOLBQ9NRJ5 636 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 MIOXQ9UGB7 285 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 LRCH1Q9Y2L9 728 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 NOP16Q9Y3C1 178 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 AUP1Q9Y679 476 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 XRCC2O43543 280 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 GMDSO60547 372 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 GLCEO94923 617 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 HMGN1P05114 100 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 GRPP07492 148 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 WNT2P09544 360 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 H2BFMP0C1H6 154 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF12P17014 697 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 FPR2P25090 351 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 FASP25445 335 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 GATA4P43694 442 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 CRISP1P54107 249 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 RPS7P62081 194 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 ACTG1P63261 375 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF404Q494X3 552 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 NLRC3Q7RTR2 1065 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 CPOQ8IVL8 374 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 CELF2-AS1Q8N7Q2 184 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 DEFB108BQ8NET1 73 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 SEMA6DQ8NFY4 1073 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 OR8B3Q8NGG8 313 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 OR56B2PQ8NGI1 322 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 ERGIC1Q969X5 290 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 NEIL1Q96FI4 390 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 PLEKHA8Q96JA3 519 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 OR8B2Q96RD0 313 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 JMJD8Q96S16 334 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 ABHD6Q9BV23 337 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 SEMA6AQ9H2E6 1030 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 TOR3AQ9H497 397 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 OPA3Q9H6K4 179 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 TVP23BQ9NYZ1 205 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 MRPL15Q9P015 296 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 INSIG2Q9Y5U4 225 aa10.64□□□□□ -0.71
NPLOC4-213ENST00000573519 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 A6NLC8 198 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 ANKRD30BLA7E2S9 258 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 A8MXK9 166 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 G3V2T6 193 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 TRIM77I1YAP6 450 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 M0R129 80 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 SELENOFO60613 162 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 APOC1P02654 83 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 PITPNBP48739 271 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 HILS1P60008 231 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 HOXA4Q00056 320 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 SNAPC1Q16533 368 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 BTNL3Q6UXE8 466 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 FAM57BQ71RH2 274 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 SHFQ7M4L6 423 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 TIGD4Q8IY51 512 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 OR8S1Q8NH09 359 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 Q8TCH9 128 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 THEM6Q8WUY1 208 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 PYDC1Q8WXC3 89 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 DUS3LQ96G46 650 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 REEP6Q96HR9 211 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 AMELYQ99218 206 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 TEX12Q9BXU0 123 aa10.63□□□□□ -0.71
NPLOC4-213ENST00000573519 SP140LQ9H930 580 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms