RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 IGSF10Q6WRI0 2623 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 A0A096LPE4 126 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 A0A0B4J203 849 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 LOC100289279A0A1B0GTE1 492 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 A0A1W2PPZ6 126 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 MBD3L4A6NDZ8 208 aaPredicted RBP12.02□□□□□ -0.49
TPM1-215ENST00000558868 MBD3L3A6NE82 208 aaPredicted RBP12.02□□□□□ -0.49
TPM1-215ENST00000558868 MBD3L5A6NJ08 208 aaPredicted RBP12.02□□□□□ -0.49
TPM1-215ENST00000558868 XRCC2O43543 280 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 SULT1B1O43704 296 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 ALX3O95076 343 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 PATE4P0C8F1 98 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 INPP1P49441 399 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 PER3P56645 1201 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 RAB1AP62820 205 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 SPOCK1Q08629 439 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 C1orf185Q5T7R7 199 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 FAM166AQ6J272 317 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 Q6ZT83 130 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 UTS2BQ765I0 119 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 NAA40Q86UY6 237 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 CMTM4Q8IZR5 234 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 JAGN1Q8N5M9 183 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 CNEP1R1Q8N9A8 125 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 MBD3L2Q8NHZ7 208 aaPredicted RBP12.02□□□□□ -0.49
TPM1-215ENST00000558868 SLC7A6Q92536 515 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 FAM3DQ96BQ1 224 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 SGK3Q96BR1 496 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 C14orf119Q9NWQ9 140 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 ZNF224Q9NZL3 707 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 RAXQ9Y2V3 346 aa12.02□□□□□ -0.49
TPM1-215ENST00000558868 A0A0G2JMP0 313 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 A0A0X1KG70 313 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 CTDSPLO15194 276 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 LMX1BO60663 402 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 WISP2O76076 250 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 IL18BPO95998 194 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 HLA-HP01893 362 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 HLA-DQB1P01920 261 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 SERPINA5P05154 406 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 TPOP07202 933 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 ITGA5P08648 1049 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 CSF3P09919 207 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 ABOP16442 354 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 MNDAP41218 407 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 KIR2DL2P43627 348 aaPredicted RBP12.01□□□□□ -0.49
TPM1-215ENST00000558868 MAP2K3P46734 347 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
TPM1-215ENST00000558868 CLDN12P56749 244 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 P2RY14Q15391 338 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 BAK1Q16611 211 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 GLYATL3Q5SZD4 288 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 SFRP5Q5T4F7 317 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 ZNF324BQ6AW86 544 aaPredicted RBP12.01□□□□□ -0.49
TPM1-215ENST00000558868 GCNT2Q8N0V5 402 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 C1orf162Q8NEQ5 155 aaPredicted RBP12.01□□□□□ -0.49
TPM1-215ENST00000558868 SEMA6DQ8NFY4 1073 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 OR4M2Q8NGB6 313 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 OR13C9Q8NGT0 318 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 SYNPRQ8TBG9 265 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 PTX4Q96A99 478 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 PHF21AQ96BD5 680 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 HAVCR1Q96D42 359 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 LYZL4Q96KX0 146 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 C1QTNF5Q9BXJ0 243 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
TPM1-215ENST00000558868 DIABLOQ9NR28 239 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 PLSCR4Q9NRQ2 329 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 RHBDL2Q9NX52 303 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 PROCRQ9UNN8 238 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 FREM2Q5SZK8 3169 aa12.01□□□□□ -0.49
TPM1-215ENST00000558868 A0A1W2PQ09 198 aa12□□□□□ -0.49
TPM1-215ENST00000558868 CIB4A0PJX0 185 aa12□□□□□ -0.49
TPM1-215ENST00000558868 ARSBP15848 533 aa12□□□□□ -0.49
TPM1-215ENST00000558868 STOMP27105 288 aa12□□□□□ -0.49
TPM1-215ENST00000558868 APLNRP35414 380 aa12□□□□□ -0.49
TPM1-215ENST00000558868 POU3F4P49335 361 aa12□□□□□ -0.49
TPM1-215ENST00000558868 MMP15P51511 669 aa12□□□□□ -0.49
TPM1-215ENST00000558868 UBE2NP61088 152 aaKnown RBP12□□□□□ -0.49
TPM1-215ENST00000558868 CXADRP78310 365 aa12□□□□□ -0.49
TPM1-215ENST00000558868 MRPS10P82664 201 aaKnown RBP12□□□□□ -0.49
TPM1-215ENST00000558868 RIPPLY1Q0D2K3 151 aa12□□□□□ -0.49
TPM1-215ENST00000558868 MALLQ13021 153 aa12□□□□□ -0.49
TPM1-215ENST00000558868 ASAH1Q13510 395 aa12□□□□□ -0.49
TPM1-215ENST00000558868 SNAI3Q3KNW1 292 aa12□□□□□ -0.49
TPM1-215ENST00000558868 C2orf76Q3KRA6 126 aa12□□□□□ -0.49
TPM1-215ENST00000558868 TBRG1Q3YBR2 411 aa12□□□□□ -0.49
TPM1-215ENST00000558868 CPEB3Q8NE35 698 aaKnown RBP12□□□□□ -0.49
TPM1-215ENST00000558868 OR51D1Q8NGF3 324 aa12□□□□□ -0.49
TPM1-215ENST00000558868 OR51A2Q8NGJ7 313 aa12□□□□□ -0.49
TPM1-215ENST00000558868 SLC25A28Q96A46 364 aa12□□□□□ -0.49
TPM1-215ENST00000558868 RFT1Q96AA3 541 aa12□□□□□ -0.49
TPM1-215ENST00000558868 SLC25A38Q96DW6 304 aa12□□□□□ -0.49
TPM1-215ENST00000558868 CPNE2Q96FN4 548 aaPredicted RBP12□□□□□ -0.49
TPM1-215ENST00000558868 BOD1Q96IK1 185 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms