RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ZNF665Q9H7R5 613 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 SP140LQ9H930 580 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 UBAP1Q9NZ09 502 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 USE1Q9NZ43 259 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 COPS3Q9UNS2 423 aa9.99□□□□□ -0.81
RAB5C-204ENST00000547517 PRR32B1ATL7 298 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 ALDH3A2P51648 485 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 EFNB1P98172 346 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 ZIK1Q3SY52 487 aaPredicted RBP9.98□□□□□ -0.81
RAB5C-204ENST00000547517 CHRFAM7AQ494W8 412 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 IL17RELQ6ZVW7 336 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 MOGAT3Q86VF5 341 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 SLC35F2Q8IXU6 374 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 PQLC1Q8N2U9 271 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 OR51G2Q8NGK0 314 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 SPSB4Q96A44 273 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 RAB39BQ96DA2 213 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 ADGRL4Q9HBW9 690 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 GCM1Q9NP62 436 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 IMPAD1Q9NX62 359 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 ZNF319Q9P2F9 582 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 IKZF2Q9UKS7 526 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 NOP16Q9Y3C1 178 aaKnown RBP9.98□□□□□ -0.81
RAB5C-204ENST00000547517 NPTNQ9Y639 398 aa9.98□□□□□ -0.81
RAB5C-204ENST00000547517 hCG_38984A0A1B0GV85 526 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 A0A1B0GWJ7 208 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 B4DSR2 109 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 APOL3O95236 402 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 BAG2O95816 211 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 CYB5R3P00387 301 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-204ENST00000547517 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 IGHV2-5P01817 119 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 MSMBP08118 114 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 SBK2P0C263 348 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 CDC42P60953 191 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 LMO4P61968 165 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 BTG1P62324 171 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 FAM3AP98173 230 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 PRAMEF6Q5VXH4 476 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 KCTD18Q6PI47 426 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-204ENST00000547517 GLCCI1Q86VQ1 547 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 OR8B12Q8NGG6 310 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 OR8J1Q8NGP2 316 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 OR51F2Q8NH61 342 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 ASB17Q8WXJ9 295 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 SGK3Q96BR1 496 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 C1orf159Q96HA4 380 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 OR8B4Q96RC9 309 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 SIGLEC11Q96RL6 698 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 TBX5Q99593 518 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 C9orf16Q9BUW7 83 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 MROQ9BYG7 248 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 SLC22A4Q9H015 551 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 SHARPINQ9H0F6 387 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 NIPAL2Q9H841 368 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 TMEM160Q9NX00 188 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 MRPL15Q9P015 296 aaKnown RBP9.97□□□□□ -0.81
RAB5C-204ENST00000547517 CDC42EP3Q9UKI2 254 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 TMEM14AQ9Y6G1 99 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 MALRD1Q5VYJ5 2156 aa9.97□□□□□ -0.81
RAB5C-204ENST00000547517 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.96□□□□□ -0.814e-7■■■□□ 16.3
RAB5C-204ENST00000547517 DYSFO75923 2080 aa9.96□□□□□ -0.81
RAB5C-204ENST00000547517 ANKRD30BLA7E2S9 258 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 TMEM178BH3BS89 294 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 ZNF205O95201 554 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 CFL1P23528 166 aaKnown RBP9.96□□□□□ -0.82
RAB5C-204ENST00000547517 HTR1FP30939 366 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 CD200P41217 278 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 DVL1P1P54792 670 aaPredicted RBP9.96□□□□□ -0.82
RAB5C-204ENST00000547517 CXCR4P61073 352 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 ROM1Q03395 351 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 MAB21L1Q13394 359 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 ZMYND11Q15326 602 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 CR1LQ2VPA4 569 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 FAM120AOSQ5T036 256 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 COMMD2Q86X83 199 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 EME1Q96AY2 570 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 TMEM186Q96B77 213 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 MBOAT4Q96T53 435 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 PAPOLGQ9BWT3 736 aaKnown RBP9.96□□□□□ -0.82
RAB5C-204ENST00000547517 BEX2Q9BXY8 128 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 RGCCQ9H4X1 137 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 UFSP2Q9NUQ7 469 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 CLN6Q9NWW5 311 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 FAM206AQ9NX38 181 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 LPAR3Q9UBY5 353 aa9.96□□□□□ -0.82
RAB5C-204ENST00000547517 WARS2Q9UGM6 360 aaKnown RBP9.96□□□□□ -0.82
RAB5C-204ENST00000547517 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.95□□□□□ -0.82
RAB5C-204ENST00000547517 TMEM269A0A1B0GVZ9 245 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 LRRC30A6NM36 301 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 ZNF670-ZNF695F2Z2N8 137 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 IFNL4K9M1U5 179 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 PHYHO14832 338 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 MAGEB4O15481 346 aaPredicted RBP9.95□□□□□ -0.82
RAB5C-204ENST00000547517 GMDSO60547 372 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 FAM20BO75063 409 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 ZNF254O75437 659 aa9.95□□□□□ -0.82
RAB5C-204ENST00000547517 IRF2P14316 349 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms