RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 LRRN1Q6UXK5 716 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 CD300LDQ6UXZ3 194 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 BCL6BQ8N143 479 aaPredicted RBP13.54□□□□□ -0.24
DDX55-212ENST00000544738 SPERTQ8NA61 448 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 SLAMF6Q96DU3 332 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 KCNJ15Q99712 375 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 C1orf21Q9H246 121 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 ZNF69Q9UC07 566 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 RYR3Q15413 4870 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 ZNF878C9JN71 531 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 SOX14O95416 240 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
DDX55-212ENST00000544738 T-ENOLP0DO92 83 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 ZNF3P17036 446 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 CA6P23280 308 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 PMELP40967 661 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 PRSS12P56730 875 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 ZNF92Q03936 586 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 PAX8Q06710 450 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 LYPD4Q6UWN0 246 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 OR4Q3Q8NH05 313 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 TEX47Q8TBZ9 253 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 GIPC3Q8TF64 312 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 RAB40AQ8WXH6 277 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 TMIGD2Q96BF3 282 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 MMP27Q9H306 513 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 SP140LQ9H930 580 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 FN3KRPQ9HA64 309 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 CMC2Q9NRP2 79 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 CENPMQ9NSP4 180 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 ARMC1Q9NVT9 282 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 VNN3Q9NY84 501 aa13.53□□□□□ -0.24
DDX55-212ENST00000544738 MRPL15Q9P015 296 aaKnown RBP13.53□□□□□ -0.24
DDX55-212ENST00000544738 XRCC2O43543 280 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 CST1P01037 141 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 APOC1P02654 83 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 GYPBP06028 91 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 CD80P33681 288 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 DDOSTP39656 456 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 PITPNBP48739 271 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 PRKXP51817 358 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 GRB2P62993 217 aaKnown RBP13.52□□□□□ -0.25
DDX55-212ENST00000544738 PAX2Q02962 417 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 MZT1Q08AG7 82 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 KCNJ8Q15842 424 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 SNAI3Q3KNW1 292 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 C17orf107Q6ZR85 190 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 DCDC5Q6ZRR9 648 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 OR10G2Q8NGC3 310 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 OR6K6Q8NGW6 343 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 OR2AE1Q8NHA4 323 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 ADAT1Q9BUB4 502 aaKnown RBP13.52□□□□□ -0.25
DDX55-212ENST00000544738 TOR3AQ9H497 397 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 UFSP2Q9NUQ7 469 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 TAS2R1Q9NYW7 299 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 RNF7Q9UBF6 113 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 CLN8Q9UBY8 286 aa13.52□□□□□ -0.25
DDX55-212ENST00000544738 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.51□□□□□ -0.25
DDX55-212ENST00000544738 KIR2DS1A0A191URI9 304 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 H3BN98 237 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 M0QZ24 198 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 PHYHO14832 338 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 FAM20BO75063 409 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 PTBP3O95758 552 aaKnown RBP13.51□□□□□ -0.25
DDX55-212ENST00000544738 KNG1P01042 644 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 SLC9A3R2Q15599 337 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 MPPED2Q15777 294 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 TUSC1Q2TAM9 212 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 KLF17Q5JT82 389 aaPredicted RBP13.51□□□□□ -0.25
DDX55-212ENST00000544738 FAM201AQ5SY85 155 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 GLYATL3Q5SZD4 288 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 PRAMEF6Q5VXH4 476 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 RHOUQ7L0Q8 258 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 KIR3DL3Q8N743 410 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 CCDC124Q96CT7 223 aaKnown RBP13.51□□□□□ -0.25
DDX55-212ENST00000544738 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
DDX55-212ENST00000544738 FEVQ99581 238 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 NIPSNAP1Q9BPW8 284 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 CHID1Q9BWS9 393 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 C14orf119Q9NWQ9 140 aa13.51□□□□□ -0.25
DDX55-212ENST00000544738 DHRS12A0PJE2 317 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 AQP12BA6NM10 295 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 GNGT2O14610 69 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 ACOT8O14734 319 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 CLUP10909 449 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 PSKH1P11801 424 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
DDX55-212ENST00000544738 HSD11B1P28845 292 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 GRK5P34947 590 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 NPY4RP50391 375 aa13.5□□□□□ -0.25
DDX55-212ENST00000544738 EIF2B1Q14232 305 aaKnown RBP13.5□□□□□ -0.25
DDX55-212ENST00000544738 LINC01590Q5TEZ4 76 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms