RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 OR2T7P0C7T2 308 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 MTNR1AP48039 350 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 FAM3AP98173 230 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 TIGD6Q17RP2 521 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 OR8B12Q8NGG6 310 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 OR56B2PQ8NGI1 322 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 OR2T27Q8NH04 317 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 ITLN1Q8WWA0 313 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 TBX5Q99593 518 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 IL19Q9UHD0 177 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 MRM2Q9UI43 246 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 IKZF2Q9UKS7 526 aa19.25■□□□□ 0.67
SFSWAP-204ENST00000535399 MPZL2O60487 215 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 GPR6P46095 362 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 RIDAP52758 137 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 EGR3Q06889 387 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 TMEM249Q2WGJ8 235 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF555Q8NEP9 628 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 RNFT2Q96EX2 444 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 MEGF10Q96KG7 1140 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 OR2V2Q96R30 315 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 RGCCQ9H4X1 137 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 TREM2Q9NZC2 230 aa19.24■□□□□ 0.67
SFSWAP-204ENST00000535399 TMEM269A0A1B0GVZ9 245 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 ACOD1A6NK06 481 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 PPIHO43447 177 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 SRSF10O75494 262 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 HLA-DPB1P04440 258 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 HEXAP06865 529 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 CFL1P23528 166 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 ATP6V1E1P36543 226 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 HNRNPA0Q13151 305 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 HFEQ30201 348 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF684Q5T5D7 378 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 OR10H4Q8NGA5 316 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 CCL17Q92583 94 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 LYZL4Q96KX0 146 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 MRPL15Q9P015 296 aaKnown RBP19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 CR1P17927 2039 aa19.23■□□□□ 0.67
SFSWAP-204ENST00000535399 LRP5LA4QPB2 252 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 F5H5P2 479 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 J3QRE1 110 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 CA6P23280 308 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 DDOSTP39656 456 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 GSK3AP49840 483 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 MMP16P51512 607 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 MFGE8Q08431 387 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 GFOD2Q3B7J2 385 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF829Q3KNS6 432 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 Q71RC1 249 aaPredicted RBP19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 APH1BQ8WW43 257 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 DCAF16Q9NXF7 216 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 ABCA1O95477 2261 aa19.22■□□□□ 0.67
SFSWAP-204ENST00000535399 SNTNA6NMZ2 147 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 PNPP00491 289 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 TNFRSF1AP19438 455 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 ADARB1P78563 741 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF85Q03923 595 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF91Q05481 1191 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 SLC34A1Q06495 639 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 ZNF691Q5VV52 312 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 TTC23Q5W5X9 447 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 PLEKHG7Q6ZR37 379 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 CYGBQ8WWM9 190 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 Q96MT0 163 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 SOX7Q9BT81 388 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 PBOV1Q9GZY1 135 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 SLC22A4Q9H015 551 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 RNPEPL1Q9HAU8 725 aa19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 EXOGQ9Y2C4 368 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-204ENST00000535399 CLDN25C9JDP6 229 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 WNT9BO14905 357 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 CLIC3O95833 236 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 IGHV4-31P0DP07 118 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 DBTP11182 482 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 RBMXP38159 391 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 SRP9P49458 86 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 CHN2P52757 468 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 OR8G1Q15617 311 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 OR8B8Q15620 311 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 DHRSXQ8N5I4 330 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 PPP1R14AQ96A00 147 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 LGALS12Q96DT0 336 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 TMEM106BQ9NUM4 274 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 NUFIP1Q9UHK0 495 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 ZNF391Q9UJN7 358 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 NOP16Q9Y3C1 178 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 R4GMQ9 66 aa19.2■□□□□ 0.66
SFSWAP-204ENST00000535399 A0A0U1RQV5 110 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 METTL15A6NJ78 407 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 CD5LO43866 347 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 WBP4O75554 376 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 KRT8P05787 483 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 CD200P41217 278 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 IL5RAQ01344 420 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 SLC3A1Q07837 685 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 MAB21L1Q13394 359 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 AVPI1Q5T686 147 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 CELF2-AS1Q8N7Q2 184 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 SIGLEC11Q96RL6 698 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms