RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TRAF4Q9BUZ4 470 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 NELFAQ9H3P2 528 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 MAGIXQ9H6Y5 334 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 SLC7A10Q9NS82 523 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 ASB6Q9NWX5 421 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 IMPAD1Q9NX62 359 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 EIF3KQ9UBQ5 218 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 MLXQ9UH92 298 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 NAGKQ9UJ70 344 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 KCNK7Q9Y2U2 307 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 TESMINQ9Y4I5 508 aa5.5□□□□□ -1.53
ATPAF1-209ENST00000529214 CRYBG3Q68DQ2 2970 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ASH1LQ9NR48 2969 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CELSR2Q9HCU4 2923 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 NBPF19A0A087WUL8 3843 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 TRBV4-1A0A0J9YWV2 114 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 METTL15A6NJ78 407 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 C11orf98E9PRG8 122 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 TRAF3IP2O43734 574 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 GADD45GO95257 159 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 IGHV3-9P01782 118 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 AMY1AP04745 511 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 S100A8P05109 93 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 OR2T7P0C7T2 308 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CALCBP10092 127 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 PPP3CBP16298 524 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 COX5AP20674 150 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 MAKP20794 623 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 IGHV1-2P23083 117 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CPT2P23786 658 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CCKARP32238 428 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 AQP2P41181 271 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 LIMS1P48059 325 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 FOXG1P55316 489 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ATP5IP56385 69 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 SCGB2A2Q13296 93 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CDK5R2Q13319 367 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 SNTB2Q13425 540 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 FHL1Q13642 323 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 RIN1Q13671 783 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CDK10Q15131 360 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 MED22Q15528 200 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 C9orf152Q5JTZ5 239 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 HACD4Q5VWC8 232 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ANKRD34AQ69YU3 496 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 DGAT2L7PQ6IED9 249 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 NIPAL3Q6P499 406 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 TMEM108Q6UXF1 575 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CASP12Q6UXS9 341 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ASRGL1Q7L266 308 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 KLBQ86Z14 1044 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 LINC00346Q8IVM7 164 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 FOXRED2Q8IWF2 684 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF433Q8N7K0 673 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 STEAP2Q8NFT2 490 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 OR10A7Q8NGE5 316 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 OR5T2Q8NGG2 359 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CANT1Q8WVQ1 401 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 GLMPQ8WWB7 406 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 LRR1Q96L50 414 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 PACRGQ96M98 296 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 MUS81Q96NY9 551 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 TNFRSF13CQ96RJ3 184 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 EMC6Q9BV81 110 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 POLDIP3Q9BY77 421 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 LINC00470Q9BZP3 86 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 SLCO5A1Q9H2Y9 848 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ABCB10Q9NRK6 738 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 ING3Q9NXR8 418 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 PDP1Q9P0J1 537 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 UPB1Q9UBR1 384 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 RCE1Q9Y256 329 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 NUBP2Q9Y5Y2 271 aa5.49□□□□□ -1.53
ATPAF1-209ENST00000529214 CACNA1CQ13936 2221 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 SPTAN1Q13813 2472 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 MPDZO75970 2070 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 A0A1W2PPQ1 181 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 TCRBV3S1A0A5B6 114 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 DHRS12A0PJE2 317 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 FAM90A20PA6NIJ5 464 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF726A6NNF4 738 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 EFCAB9A8MZ26 197 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 RPL36A-HNRNPH2H7BZ11 118 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 CDC42EP2O14613 210 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 CASKO14936 926 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 RNF13O43567 381 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 SLC43A1O75387 559 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 UPK3AO75631 287 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 LYZL6O75951 148 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 F13BP05160 661 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 RAP2AP10114 183 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 HOXB6P17509 224 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 POU1F1P28069 291 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 MPGP29372 298 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 RPL5P46777 297 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 ESRRGP62508 458 aa5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 RPS4XP62701 263 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 POU3F1Q03052 451 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-209ENST00000529214 HSF2Q03933 536 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms