RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 C22orf15Q8WYQ4 148 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ST8SIA1Q92185 356 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 TIMD4Q96H15 378 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR5M11Q96RB7 305 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 IL4I1Q96RQ9 567 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DPH7Q9BTV6 452 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 CCDC28BQ9BUN5 200 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 GLIPR2Q9H4G4 154 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ANKRD19PQ9H560 264 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 REEP4Q9H6H4 257 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 NMRAL1Q9HBL8 299 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DDX18Q9NVP1 670 aaKnown RBP3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 PRODH2Q9UF12 536 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ASIC3Q9UHC3 531 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 MOKQ9UQ07 419 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 PLLPQ9Y342 182 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 TET2Q6N021 2002 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 UQCRHLA0A096LP55 91 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A0G2JMM0 328 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1W2PPB8 328 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1W2PPE3 182 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1W2PQ72 361 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1W2PRS3 328 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 DHRS7CA6NNS2 312 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 KIR3DP1A8MWS1 328 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 EPM2AB3EWF7 344 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 FOXE1O00358 373 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 LY6HO94772 140 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 CDK14O94921 469 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 GNA14O95837 355 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 IGKV3-20P01619 116 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 MELTFP08582 738 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 ANXA5P08758 320 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 UMPSP11172 480 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 ATP1B2P14415 290 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 ETS2P15036 469 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 NCK1P16333 377 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 PRTN3P24158 256 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 RGRP47804 291 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 RPL29P47914 159 aaKnown RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 GCLMP48507 274 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 CRIP2P52943 208 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 PKNOX1P55347 436 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 YWHAEP62258 255 aaKnown RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 RCAN2Q14206 197 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 ARL6IP1Q15041 203 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 GLYR1Q49A26 553 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 NHLRC3Q5JS37 347 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 ATL3Q6DD88 541 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 HSDL2Q6YN16 418 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 NUDCD3Q8IVD9 361 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 C9orf40Q8IXQ3 194 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR7G2Q8NG99 324 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 ADAMTS16Q8TE57 1224 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 UCN3Q969E3 161 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMIGD2Q96BF3 282 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 B9D2Q9BPU9 175 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 MAPKAP1Q9BPZ7 522 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 SELENOSQ9BQE4 189 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 C11orf70Q9BRQ4 267 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 RSPO3Q9BXY4 272 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 XKR8Q9H6D3 395 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 CAB39LQ9H9S4 337 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 NTN4Q9HB63 628 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 BEX1Q9HBH7 125 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 DCDC2Q9UHG0 476 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 NUP50Q9UKX7 468 aa3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 RPL36Q9Y3U8 105 aaKnown RBP3.63□□□□□ -1.83
HMGB1P23-201ENST00000518743 NCKAP5O14513 1909 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A0J9YY10 115 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 TRBV11-1A0A0K0K1C0 115 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 LOC100131303A0A0U1RQF7 123 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1W2PQ67 120 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 GOLGA6L10A6NI86 522 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 GOLGA6L19H0YKK7 550 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 K7EIL1 84 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 FCN1O00602 326 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 DNALI1O14645 258 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 RGS16O15492 202 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 UGT1A9O60656 530 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC2A10O95528 541 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 FTH1P02794 183 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 PABPC4LP0CB38 370 aaKnown RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 UGT2B7P16662 529 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 HOXB6P17509 224 aaKnown RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 CALCRP30988 508 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 GABRA4P48169 554 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 PLP1P60201 277 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 AP1S1P61966 158 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 TGM3Q08188 693 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 CD47Q08722 323 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 CYLC2Q14093 348 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 PGGHGQ32M88 737 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 SAMD4BQ5PRF9 694 aaKnown RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 PRMT9Q6P2P2 845 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 ENPP6Q6UWR7 440 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 SSX9Q7RTT3 188 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 ERI1Q8IV48 349 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms