RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 QPRTQ15274 297 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 GABRA6Q16445 453 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 TMEM183BQ1AE95 376 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 THEM4Q5T1C6 240 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 MLIPQ5VWP3 458 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 ADNP2Q6IQ32 1131 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 C12orf54Q6X4T0 127 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 MBOAT2Q6ZWT7 520 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 CBLN2Q8IUK8 224 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 TMEM183AQ8IXX5 376 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 STPG2Q8N412 459 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 TRAM1L1Q8N609 369 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR51L1Q8NGJ5 315 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR51F2Q8NH61 342 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 ITFG1Q8TB96 612 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 APH1BQ8WW43 257 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 ISOC2Q96AB3 205 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 CREB3L1Q96BA8 519 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 LRRC39Q96DD0 335 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 LINC00597Q9H2U6 94 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 GAL3ST2Q9H3Q3 398 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 IFNKQ9P0W0 207 aa3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNFX1Q9P2E3 1918 aaKnown RBP3.64□□□□□ -1.83
HMGB1P3-201ENST00000502802 KIAA0100Q14667 2235 aaKnown RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 DNAH12Q6ZR08 3092 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 PLAC8L1A1L4L8 177 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 A6NDN8 102 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 NCBP2LA6PVI3 153 aaKnown RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 LAD1O00515 517 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 IGLV2-23P01705 113 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 FABP3P05413 133 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 IGKV5-2P06315 115 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 RETP07949 1114 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 ATF6P18850 670 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 RAB4AP20338 218 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 GABRR2P28476 465 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 CFHR2P36980 270 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 WNT4P56705 351 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 VSX2P58304 361 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 KRTAP10-9P60411 292 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 CDH17Q12864 832 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 TSC22D1Q15714 1073 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 POU2AF1Q16633 256 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 TMEM255AQ5JRV8 349 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 LYPD2Q6UXB3 125 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 C6orf120Q7Z4R8 191 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 VKORC1L1Q8N0U8 176 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 LINC01555Q8NAE3 123 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR52E2Q8NGJ4 325 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 ANP32BQ92688 251 aaKnown RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 CIDECQ96AQ7 238 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 SEH1LQ96EE3 360 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 LZTS2Q9BRK4 669 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 CALN1Q9BXU9 219 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 HAUS4Q9H6D7 363 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 PATZ1Q9HBE1 687 aaKnown RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 PDFQ9HBH1 243 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 DMAP1Q9NPF5 467 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 MCUBQ9NWR8 336 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 ADAM22Q9P0K1 906 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 CD84Q9UIB8 345 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 STK38LQ9Y2H1 464 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 OTOFQ9HC10 1997 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 PAPPA2Q9BXP8 1791 aa3.63□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF609O15014 1411 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 ARAP2Q8WZ64 1704 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 IGLV1-36A0A0B4J1U3 117 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 ERICH4A6NGS2 130 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC22A20A6NK97 555 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 NDUFS8O00217 210 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 KDELR3O43731 214 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 HPRT1P00492 218 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 OXTP01178 125 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 IVLP07476 585 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 TACSTD2P09758 323 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 ELK1P19419 428 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 WARSP23381 471 aaKnown RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 OMGP23515 440 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CCNE1P24864 410 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 RPS12P25398 132 aaKnown RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CASQ1P31415 396 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CEACAM3P40198 252 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CEACAM6P40199 344 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CDKN2BP42772 138 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CYB561P49447 251 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 SERPINB8P50452 374 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 ATP6V0D1P61421 351 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF829Q3KNS6 432 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 FBXO48Q5FWF7 155 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 TPRG1LQ5T0D9 272 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC25A25Q6KCM7 469 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 HORMAD1Q86X24 394 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CBR4Q8N4T8 237 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 ASCC1Q8N9N2 400 aaKnown RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CHST4Q8NCG5 386 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 RPEQ96AT9 228 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 WFIKKN1Q96NZ8 548 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 HDHD3Q9BSH5 251 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 NAA50Q9GZZ1 169 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms