RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 XRCC2O43543 280 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 ICMTO60725 284 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 LILRA1O75019 489 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 HSMCR30P0CW71 290 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 NAT2P11245 290 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 DCTDP32321 178 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 WNT4P56705 351 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 SNRPD2P62316 118 aaKnown RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 SLC3A1Q07837 685 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 PSG7Q13046 419 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 AGAP6Q5VW22 663 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 MBNL2Q5VZF2 373 aaKnown RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 PRSS48Q7RTY5 328 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 KCTD20Q7Z5Y7 419 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 ZCCHC24Q8N2G6 241 aaKnown RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 NANOGP1Q8N7R0 232 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF611Q8N823 705 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 OR56B2PQ8NGI1 322 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 OR2G2Q8NGZ5 317 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 DVL3Q92997 716 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 COG8Q96MW5 612 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 PDCD1LG2Q9BQ51 273 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 MOB1AQ9H8S9 216 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 MSL2Q9HCI7 577 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 TRIM36Q9NQ86 728 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 FRRS1LQ9P0K9 344 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 NUFIP1Q9UHK0 495 aaKnown RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 PURGQ9UJV8 347 aaKnown RBP11.33□□□□□ -0.6
HDAC1-208ENST00000482310 OTOGQ6ZRI0 2925 aa11.33□□□□□ -0.6
HDAC1-208ENST00000482310 PDZD2O15018 2839 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 TANC2Q9HCD6 1990 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 USF3Q68DE3 2245 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 TRBV2A0A0J9YWF9 115 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 LOC107986453A0A1B0GWG9 222 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 CD8AP01732 235 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 DANCRP0C864 163 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF250P15622 560 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 MMP16P51512 607 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 IRF3Q14653 427 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 C20orf204Q6ZNR8 217 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 ELMOD2Q8IZ81 293 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF676Q8N7Q3 588 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 VRK1Q99986 396 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-208ENST00000482310 TRAF4Q9BUZ4 470 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-208ENST00000482310 CDCA4Q9BXL8 241 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 CBLN4Q9NTU7 201 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 BABAM2Q9NXR7 383 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 SIRT4Q9Y6E7 314 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-208ENST00000482310 POLQO75417 2590 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 DYSFO75923 2080 aa11.32□□□□□ -0.6
HDAC1-208ENST00000482310 CSMD2Q7Z408 3487 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 hCG_38984A0A1B0GV85 526 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 A0A1B0GVI7 797 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 B9A039 149 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 J3QW42 95 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 M0R233 179 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 SYT7O43581 403 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 SPRY3O43610 288 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 LMX1BO60663 402 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 RAC2P15153 192 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 ATP6V1B1P15313 513 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 GSK3AP49840 483 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 FAM3AP98173 230 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 NEDD8Q15843 81 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
HDAC1-208ENST00000482310 MST1LQ2TV78 715 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 DMRTC1Q5HYR2 192 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 PAMR1Q6UXH9 720 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 OR10AD1Q8NGE0 317 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 OR10AC1Q8NH08 325 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 HAVCR1Q96D42 359 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 LURAP1Q96LR2 239 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 YTHDF1Q9BYJ9 559 aaKnown RBP11.31□□□□□ -0.6
HDAC1-208ENST00000482310 COMMD4Q9H0A8 199 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 ST6GALNAC2Q9UJ37 374 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 LSM2Q9Y333 95 aaKnown RBP11.31□□□□□ -0.6
HDAC1-208ENST00000482310 SPG11Q96JI7 2443 aa11.31□□□□□ -0.6
HDAC1-208ENST00000482310 IGLV3-9A0A075B6K5 115 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 IGHV3-64DA0A0J9YX35 117 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 A0A0U1RQV5 110 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 ZSCAN5BA6NJL1 495 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 ACOD1A6NK06 481 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 OR4C45A6NMZ5 311 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 CD300LBA8K4G0 201 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 H3BSA7 217 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 RAF1P04049 648 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 UBCP0CG48 685 aaKnown RBP11.3□□□□□ -0.6
HDAC1-208ENST00000482310 FAHP16930 419 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 CELP19835 753 aa11.3□□□□□ -0.6
HDAC1-208ENST00000482310 ACKR3P25106 362 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms