RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CFLARO15519 480 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 FGGP02679 453 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 BMI1P35226 326 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 GDNFP39905 211 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 GPR12P47775 334 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 XGP55808 180 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 PCBD1P61457 104 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 IL18R1Q13478 541 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 HIST3H3Q16695 136 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 CEP85LQ5SZL2 805 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 ATPAF1Q5TC12 328 aaPredicted RBP4.95□□□□□ -1.62
HDAC3-206ENST00000471968 MINOS1Q5TGZ0 78 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 FAM27BQ5VT28 67 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 TTC27Q6P3X3 843 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 TNFAIP8L2Q6P589 184 aaPredicted RBP4.95□□□□□ -1.62
HDAC3-206ENST00000471968 C5orf46Q6UWT4 87 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 ZNF788Q6ZQV5 615 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 GPRIN3Q6ZVF9 776 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 KCTD8Q6ZWB6 473 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 SYT9Q86SS6 491 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 CCDC170Q8IYT3 715 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 C10orf53Q8N6V4 93 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 NOXO1Q8NFA2 376 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 OR11H6Q8NGC7 330 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 OR5L1Q8NGL2 311 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 PSMA8Q8TAA3 256 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 C12orf43Q96C57 262 aaKnown RBP4.95□□□□□ -1.62
HDAC3-206ENST00000471968 MED30Q96HR3 178 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 MOGAT1Q96PD6 335 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 CPNE1Q99829 537 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 ELOVL1Q9BW60 279 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 OR51J1Q9H342 316 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 SLA2Q9H6Q3 261 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 PAPOLBQ9NRJ5 636 aaKnown RBP4.95□□□□□ -1.62
HDAC3-206ENST00000471968 MBNL3Q9NUK0 354 aaKnown RBP4.95□□□□□ -1.62
HDAC3-206ENST00000471968 TBC1D23Q9NUY8 699 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 MRPL39Q9NYK5 338 aaKnown RBP4.95□□□□□ -1.62
HDAC3-206ENST00000471968 USE1Q9NZ43 259 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 BAIAP2L1Q9UHR4 511 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 FBXL7Q9UJT9 491 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 CAPN6Q9Y6Q1 641 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 COMMD3-BMI1R4GMX3 469 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 MINOS1-NBL1R4GNA1 71 aa4.95□□□□□ -1.62
HDAC3-206ENST00000471968 IGKV1D-43A0A0B4J1Z2 117 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 A0A0G2JLM5 398 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 CDHR4A6H8M9 788 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 LINC01619G3V211 115 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 FAM229AH3BQW9 127 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 SIGLEC5O15389 551 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 SMIM24O75264 130 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 SEC22BO75396 215 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 RGS11O94810 467 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 OR6A2O95222 327 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 AGR2O95994 175 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 IGHG2P01859 326 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 BGLAPP02818 100 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 CST2P09228 141 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 COX5BP10606 129 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 LAMP1P11279 417 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 ZNF823P16415 610 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 SDC1P18827 310 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 IMPDH1P20839 514 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 GSK3AP49840 483 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 HOXC5Q00444 222 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 RUNX1Q01196 453 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 CLCQ05315 142 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 C10orf128Q5T292 105 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 TMEM200BQ69YZ2 307 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 PDIK1LQ8N165 341 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 C5orf56Q8N8D9 126 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 PCYOX1LQ8NBM8 494 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 SPC24Q8NBT2 197 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 ZNRF1Q8ND25 227 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 TMEM185AQ8NFB2 350 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 UBALD1Q8TB05 177 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 TCP10LQ8TDR4 215 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 SPRYD4Q8WW59 207 aaPredicted RBP4.94□□□□□ -1.62
HDAC3-206ENST00000471968 UBE2E2Q96LR5 201 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 NEURL2Q9BR09 285 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 CHCHD6Q9BRQ6 235 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 GON7Q9BXV9 100 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 DNTTIP1Q9H147 329 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 HAO2Q9NYQ3 351 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 ADA2Q9NZK5 511 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 VSIG4Q9Y279 399 aa4.94□□□□□ -1.62
HDAC3-206ENST00000471968 TNXBP22105 4242 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 RNF103-CHMP3A0A140T963 221 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 RNF13O43567 381 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 KLHL2O95198 593 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 C2P06681 752 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 DBIP07108 87 aaKnown RBP4.93□□□□□ -1.62
HDAC3-206ENST00000471968 DBHP09172 617 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 PSMB8P28062 276 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 SPRP35270 261 aaPredicted RBP4.93□□□□□ -1.62
HDAC3-206ENST00000471968 GABRA2P47869 451 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 CAPZA1P52907 286 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 RPL31P62899 125 aaKnown RBP4.93□□□□□ -1.62
HDAC3-206ENST00000471968 FMODQ06828 376 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 ZNF273Q14593 569 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 KIAA0040Q15053 153 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms