RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 FMO3P31513 532 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 GRK5P34947 590 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 GNB2P62879 340 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 OR8G1Q15617 311 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 AWAT1Q58HT5 328 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 LRRN1Q6UXK5 716 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 WDR86Q86TI4 376 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 TIGD4Q8IY51 512 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 PARP8Q8N3A8 854 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 PLPP7Q8NBV4 271 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 OR8B3Q8NGG8 313 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 RNF133Q8WVZ7 376 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 SPRYD4Q8WW59 207 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-211ENST00000467464 GCDHQ92947 438 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-211ENST00000467464 CCDC124Q96CT7 223 aaKnown RBP9.96□□□□□ -0.82
PTPRF-211ENST00000467464 OR8B2Q96RD0 313 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 FEVQ99581 238 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 SLC22A4Q9H015 551 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 C1orf21Q9H246 121 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 REEP1Q9H902 201 aa9.96□□□□□ -0.82
PTPRF-211ENST00000467464 MRPL15Q9P015 296 aaKnown RBP9.96□□□□□ -0.82
PTPRF-211ENST00000467464 DYSFO75923 2080 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 NBEAL1Q6ZS30 2694 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 IGHV3OR16-10A0A075B7F0 116 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 LGALS8O00214 317 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 HKR1P10072 659 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 EGR1P18146 543 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 PRTN3P24158 256 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 OPRL1P41146 370 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 FAM3AP98173 230 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 GK3PQ14409 553 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 ZNF826PQ6ZT77 177 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 SPATC1Q76KD6 591 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 DPY19L4Q7Z388 723 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 GCSAMQ8N6F7 178 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 CCDC197Q8NCU1 140 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 OR6K6Q8NGW6 343 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 OR11L1Q8NGX0 322 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 PLEKHA8Q96JA3 519 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 DUX5Q96PT3 197 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 ABHD6Q9BV23 337 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 CHID1Q9BWS9 393 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 OPA3Q9H6K4 179 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 PPP1R3EQ9H7J1 279 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 SMURF1Q9HCE7 757 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 CENPMQ9NSP4 180 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 ZNF319Q9P2F9 582 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 RNF7Q9UBF6 113 aa9.95□□□□□ -0.82
PTPRF-211ENST00000467464 NOP16Q9Y3C1 178 aaKnown RBP9.95□□□□□ -0.82
PTPRF-211ENST00000467464 ARHGAP32A7KAX9 2087 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 hCG_38984A0A1B0GV85 526 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 GGT3PA6NGU5 568 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 RIIAD1A6NNX1 92 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 XRCC2O43543 280 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 CST1P01037 141 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 LHBP01229 141 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 IFNGP01579 166 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 MMP9P14780 707 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 ZNF3P17036 446 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 GSTT1P30711 240 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 CX3CR1P49238 355 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 BLVRAP53004 296 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 GRB2P62993 217 aaKnown RBP9.94□□□□□ -0.82
PTPRF-211ENST00000467464 EIF2B1Q14232 305 aaKnown RBP9.94□□□□□ -0.82
PTPRF-211ENST00000467464 BTNL3Q6UXE8 466 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 NLRC3Q7RTR2 1065 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 SLC16A9Q7RTY1 509 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 C11orf53Q8IXP5 236 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 HS3ST5Q8IZT8 346 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 GIPC3Q8TF64 312 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 CANT1Q8WVQ1 401 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 SGK3Q96BR1 496 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 INTS14Q96SY0 518 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 NUDT16L1Q9BRJ7 211 aaKnown RBP9.94□□□□□ -0.82
PTPRF-211ENST00000467464 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 FN3KRPQ9HA64 309 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 C1orf123Q9NWV4 160 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 CLN8Q9UBY8 286 aa9.94□□□□□ -0.82
PTPRF-211ENST00000467464 MDFIC2A0A1B0GVS7 189 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 AQP12BA6NM10 295 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 CLDN34H7C241 214 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 GLCEO94923 617 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 IRF2P14316 349 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 ZNF121P58317 390 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 FGF12P61328 243 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 ELF3P78545 371 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 BAMBIQ13145 260 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 SLC9A3R2Q15599 337 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 TEX36Q5VZQ5 186 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 SFRP4Q6FHJ7 346 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 RHOUQ7L0Q8 258 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 FAM90A1Q86YD7 464 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 ERI1Q8IV48 349 aaKnown RBP9.93□□□□□ -0.82
PTPRF-211ENST00000467464 AQP12AQ8IXF9 295 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 C3orf56Q8N813 242 aa9.93□□□□□ -0.82
PTPRF-211ENST00000467464 SPERTQ8NA61 448 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms