RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PPIL1Q9Y3C6 166 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 YEATS2Q9ULM3 1422 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 JCADQ9P266 1359 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 MYO3BQ8WXR4 1341 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 IGHV5-10-1A0A0J9YXX1 117 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SMLR1H3BR10 107 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 RPL36A-HNRNPH2H7BZ11 118 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 K7EM74 188 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 CALUO43852 315 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 EEDO75530 441 aaKnown RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 CST4P01036 141 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 C2P06681 752 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 TACSTD2P09758 323 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF250P15622 560 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 GABRG2P18507 467 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 IVDP26440 423 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 HRH1P35367 487 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SPAM1P38567 509 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 RFC3P40938 356 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SKP1P63208 163 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 TPM4P67936 248 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF33AQ06730 810 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SLAMF1Q13291 335 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ANGPT1Q15389 498 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF726P1Q15940 193 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 NDUFAF6Q330K2 333 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 FBXW9Q5XUX1 488 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SPESP1Q6UW49 350 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 CD300LGQ6UXG3 332 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SLC35D2Q76EJ3 337 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF547Q8IVP9 402 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 NKAIN4Q8IVV8 208 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 NELFCDQ8IXH7 590 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 PDIK1LQ8N165 341 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 LIX1Q8N485 282 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZFP41Q8N8Y5 198 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR2G2Q8NGZ5 317 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 DYNLL2Q96FJ2 89 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 RNF170Q96K19 258 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF396Q96N95 335 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 FOXC2Q99958 501 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ULBP2Q9BZM5 246 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZYG11BQ9C0D3 744 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 LINC00597Q9H2U6 94 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 TMEM38AQ9H6F2 299 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ANKHQ9HCJ1 492 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZDHHC4Q9NPG8 344 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 HRASLS2Q9NWW9 162 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 CCDC59Q9P031 241 aaKnown RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 SLC17A7Q9P2U7 560 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 UXTQ9UBK9 157 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ING4Q9UNL4 249 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ATP6V1DQ9Y5K8 247 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 TSSC4Q9Y5U2 329 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 ANKRD12Q6UB98 2062 aa2.21□□□□□ -2.06
HMGB1P49-201ENST00000418882 MROH7Q68CQ1 1323 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 AKNAQ7Z591 1439 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 IGHV3-74A0A0B4J1X5 117 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 GLYATL1P3A0A0U1RQE8 302 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 C7orf66A4D0T2 115 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 PLPP1O14494 284 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 RBFOX2O43251 390 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 XRCC2O43543 280 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 SOX15O60248 233 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 SMC2O95347 1197 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 TDP2O95551 362 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 TPM3P06753 285 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 GP1BAP07359 652 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 RD3LP0DJH9 198 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 IGHV1-8P0DP01 117 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 HOXB8P17481 243 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 CSNK2A2P19784 350 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 PSMB6P28072 239 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 HTR2CP28335 458 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 TEAD1P28347 426 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 TNFSF9P41273 254 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 SSR4P51571 173 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 UBE2G2P60604 165 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 ADARB1P78563 741 aaKnown RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 LOXL1Q08397 574 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 ERCC8Q13216 396 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 VAMP3Q15836 100 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 USF2Q15853 346 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 COX19Q49B96 90 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 PRMT9Q6P2P2 845 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 CMC1Q7Z7K0 106 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 CYP4Z1Q86W10 505 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 OSR2Q8N2R0 312 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 CDRT4Q8N9R6 151 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 NOXO1Q8NFA2 376 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR7G1Q8NGA0 311 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR5AR1Q8NGP9 310 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR8D1Q8WZ84 308 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR10C1Q96KK4 312 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF75AQ96N20 296 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 SPNS1Q9H2V7 528 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 RPF2Q9H7B2 306 aaKnown RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR2S2Q9NQN1 319 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZC4H2Q9NQZ6 224 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms