RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 TRAV38-1A0A0B4J264 116 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 CHP2O43745 196 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 RRP9O43818 475 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 PEX14O75381 377 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 IGF2P01344 180 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 HIST1H2ABP04908 130 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 COX5BP10606 129 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 FAHP16930 419 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 HOXB9P17482 250 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 MSR1P21757 451 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 CLNS1AP54105 237 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 NCALDP61601 193 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 TXNL4AP83876 142 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 IL5RAQ01344 420 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 GK2Q14410 553 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 PCK2Q16822 640 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 DUSP7Q16829 419 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 TEX36Q5VZQ5 186 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 TTC33Q6PID6 262 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 HIST3H2AQ7L7L0 130 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 NKAIN4Q8IVV8 208 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 MKXQ8IYA7 352 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 OR9I1Q8NGQ6 314 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 OR1F12Q8NHA8 337 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 HIST1H2ACQ93077 130 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 SLCO4A1Q96BD0 722 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 ZNF649Q9BS31 505 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 PAIP1Q9H074 479 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 RAD21L1Q9H4I0 556 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 IKZF5Q9H5V7 419 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 EDA2RQ9HAV5 297 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 SNTG1Q9NSN8 517 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 PNPOQ9NVS9 261 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 AIG1Q9NVV5 245 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 KAAG1Q9UBP8 84 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 TCF19Q9Y242 345 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 NDUFAF1Q9Y375 327 aa6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 TSSC4Q9Y5U2 329 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-206ENST00000416651 C12orf71A8MTZ7 269 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 PTBP3O95758 552 aaKnown RBP6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 TSPAN19P0C672 248 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 ETS2P15036 469 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 LBPP18428 481 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 COX7A1P24310 79 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 TGM4P49221 684 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 THBS3P49746 956 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 RGS6P49758 472 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 PCBD1P61457 104 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 CSNK2BP67870 215 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 ACSM1Q08AH1 577 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 MEP1BQ16820 701 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 DGUOKQ16854 277 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 DPY19L1Q2PZI1 675 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 INTS11Q5TA45 600 aaKnown RBP6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 SLC2A7Q6PXP3 512 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 CORO6Q6QEF8 472 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 MICU2Q8IYU8 434 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 LRRC75AQ8NAA5 344 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 PCYOX1LQ8NBM8 494 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 ADAMTS16Q8TE57 1224 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 TMEM255BQ8WV15 326 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 DPF1Q92782 380 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 DUS3LQ96G46 650 aaKnown RBP6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 SORT1Q99523 831 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 CPPED1Q9BRF8 314 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 PRSS22Q9GZN4 317 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 FAM234AQ9H0X4 552 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 TXNIPQ9H3M7 391 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 WDR55Q9H6Y2 383 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 SMURF2Q9HAU4 748 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 CACYBPQ9HB71 228 aaKnown RBP6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 SLC25A37Q9NYZ2 338 aa6.87□□□□□ -1.31
NIF3L1-206ENST00000416651 hCG_1807616A0A1W2PRN6 198 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 A6NLC8 198 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CENPBD1B2RD01 187 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CLIC1O00299 241 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 SDHDO14521 159 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 OR7A10O76100 309 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 ANP32DO95626 131 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 IFNW1P05000 195 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CTLA4P16410 223 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 TUBG1P23258 451 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CHATP28329 748 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 ECI1P42126 302 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 DAP3P51398 398 aaKnown RBP6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CDK6Q00534 326 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 FHL1Q13642 323 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 OR8G1Q15617 311 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 ZNF613Q6PF04 617 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CENPVQ7Z7K6 275 aaPredicted RBP6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CMTM4Q8IZR5 234 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 C11orf42Q8N5U0 333 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 CELF2-AS1Q8N7Q2 184 aa6.86□□□□□ -1.31
NIF3L1-206ENST00000416651 LRRC8CQ8TDW0 803 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms