RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR4N5Q8IXE1 308 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF561Q8N587 486 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 C1orf52Q8N6N3 182 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ACOT4Q8N9L9 421 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 FDCSPQ8NFU4 85 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 OR4K14Q8NGD5 310 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 OR8J2Q8NGG1 315 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 OR52N4Q8NGI2 321 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 OR4K15Q8NH41 348 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 RDH11Q8TC12 318 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 GPX8Q8TED1 209 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 DOK4Q8TEW6 326 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF431Q8TF32 576 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 CANT1Q8WVQ1 401 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 CYGBQ8WWM9 190 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 NEU4Q8WWR8 484 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 PHYHIPQ92561 330 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 FAM168AQ92567 244 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 NR4A3Q92570 626 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 UCN3Q969E3 161 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 TM4SF18Q96CE8 201 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 RCN3Q96D15 328 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 MRPS24Q96EL2 167 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 CMTM7Q96FZ5 175 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 PPP1R36Q96LQ0 422 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 Q96MT0 163 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF582Q96NG8 517 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 SLC38A2Q96QD8 506 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 GFI1Q99684 422 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 RBM4BQ9BQ04 359 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 WDR77Q9BQA1 342 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 SOSTQ9BQB4 213 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 NUDT9Q9BW91 350 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 RBM4Q9BWF3 364 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 EBPLQ9BY08 206 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 NKX6-2Q9C056 277 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 METTL8Q9H825 291 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ANKRA2Q9H9E1 313 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ZBTB20Q9HC78 741 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 CTPS2Q9NRF8 586 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 TEX10Q9NXF1 929 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 SLC2A8Q9NY64 477 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 GPR83Q9NYM4 423 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 CISD1Q9NZ45 108 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 AHSPQ9NZD4 102 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 SEC14L4Q9UDX3 406 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 PSORS1C1Q9UIG5 152 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 OAZ3Q9UMX2 235 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 RNF24Q9Y225 148 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 PIGLQ9Y2B2 252 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 ALG5Q9Y673 324 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 SIRT4Q9Y6E7 314 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 MED13Q9UHV7 2174 aa4.02□□□□□ -1.77
SF3B1-202ENST00000409915 TNRC6AQ8NDV7 1962 aaKnown RBP4.02□□□□□ -1.77
SF3B1-202ENST00000409915 NUP210LQ5VU65 1888 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 IGKV3D-11A0A0A0MRZ8 115 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 A0A0A6YYD5 115 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 GNG14A0A1W2PPG7 69 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 A0A1W2PRB8 838 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 MEX3AA1L020 520 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 PRORSD1PA6NEY8 169 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TRDCB7Z8K6 153 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 NPIPA2E9PIF3 369 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 H7C1Q1 480 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 UPK1AO00322 258 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 EI24O14681 340 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 PDCD5O14737 125 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 PLA2G10O15496 165 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 FGF17O60258 216 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 HPGDSO60760 199 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 UPK3AO75631 287 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RGS11O94810 467 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 SCELO95171 688 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 HPP00738 406 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 KLK1P06870 262 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ELANEP08246 267 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 HIST1H1BP16401 226 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 HOXB6P17509 224 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF10P21506 573 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ELK4P28324 431 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TNFSF8P32971 234 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 KCNJ3P48549 501 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ATP4BP51164 291 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 XKP51811 444 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RAG2P55895 527 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 OR4D2P58180 307 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 DNAJB13P59910 316 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RAB5BP61020 215 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RAP1AP62834 184 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 HERV-K104P63124 156 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 MRPS11P82912 194 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 BDH1Q02338 343 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 CFHR3Q02985 330 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 PJVKQ0ZLH3 352 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF79Q15937 498 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 LGALSLQ3ZCW2 172 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM35AQ53FP2 167 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 COQ5Q5HYK3 327 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF691Q5VV52 312 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 LIPKQ5VXJ0 399 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms