RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 Q6ZR03 302 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 KRTAP1-3Q8IUG1 177 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 BHLHE23Q8NDY6 225 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 BPIFB6Q8NFQ5 453 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 GGHQ92820 318 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 SIGLEC11Q96RL6 698 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 MOB1AQ9H8S9 216 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 PLCXD1Q9NUJ7 323 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 ERVK13-1Q9NX77 482 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 NUFIP1Q9UHK0 495 aaKnown RBP16.36■□□□□ 0.21
HOXA9-202ENST00000396345 OR52A1Q9UKL2 312 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 ZDHHC8Q9ULC8 765 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 SNX5Q9Y5X3 404 aa16.36■□□□□ 0.21
HOXA9-202ENST00000396345 EFCAB10A6NFE3 127 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 J3QLW9 94 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 XPNPEP2O43895 674 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 IGHV1-46P01743 117 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF19P17023 458 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 MAGEB1P43366 347 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 OR12D2P58182 307 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 FAM3AP98173 230 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 SNCBQ16143 134 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 TSTQ16762 297 aaKnown RBP16.35■□□□□ 0.21
HOXA9-202ENST00000396345 BCL2L15Q5TBC7 163 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 OR13G1Q8NGZ3 307 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 PPP1R14AQ96A00 147 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 TMEM80Q96HE8 168 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 DIRC2Q96SL1 478 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF184Q99676 751 aaPredicted RBP16.35■□□□□ 0.21
HOXA9-202ENST00000396345 RHNO1Q9BSD3 238 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 JAM3Q9BX67 310 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 G6PC2Q9NQR9 355 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 ACOXLQ9NUZ1 547 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 NKIRAS2Q9NYR9 191 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF391Q9UJN7 358 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 ITPR3Q14573 2671 aa16.35■□□□□ 0.21
HOXA9-202ENST00000396345 A0A0U1RQV5 110 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 hCG_38984A0A1B0GV85 526 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 TPD52L2O43399 206 aaKnown RBP16.34■□□□□ 0.21
HOXA9-202ENST00000396345 LILRA1O75019 489 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 ADH4P08319 380 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 PIPP12273 146 aaPredicted RBP16.34■□□□□ 0.21
HOXA9-202ENST00000396345 PSMB10P40306 273 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 GSK3AP49840 483 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 CSNK2BP67870 215 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 CCL8P80075 99 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 CLEC12BQ2HXU8 276 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 FAM209AQ5JX71 171 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 C6orf141Q5SZD1 244 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 CATSPERDQ86XM0 798 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 ELMOD2Q8IZ81 293 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 OR2Z1Q8NG97 314 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 OR56B2PQ8NGI1 322 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 RORBQ92753 470 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 LYZL4Q96KX0 146 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 C4orf36Q96KX1 117 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 SLC30A2Q9BRI3 323 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 ZNF649Q9BS31 505 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 DECR2Q9NUI1 292 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 TMEM100Q9NV29 134 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 CNOT2Q9NZN8 540 aaKnown RBP16.34■□□□□ 0.21
HOXA9-202ENST00000396345 PSORS1C1Q9UIG5 152 aa16.34■□□□□ 0.21
HOXA9-202ENST00000396345 DIMT1Q9UNQ2 313 aaKnown RBP16.34■□□□□ 0.21
HOXA9-202ENST00000396345 CHD3Q12873 2000 aaKnown RBP16.33■□□□□ 0.21
HOXA9-202ENST00000396345 NCR1O76036 304 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 HPXP02790 462 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 LIMS3P0CW19 117 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 LIMS4P0CW20 117 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 DAOP14920 347 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 TNFSF4P23510 183 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 DDOSTP39656 456 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 ST3GAL4Q11206 333 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 COMMD2Q86X83 199 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 EGFL6Q8IUX8 553 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 SYS1Q8N2H4 156 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 ZNF525Q8N782 197 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 WFDC11Q8NEX6 87 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 OR51E1Q8TCB6 317 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 UBASH3BQ8TF42 649 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 ELMOD3Q96FG2 381 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 CNBD2Q96M20 576 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 RASSF4Q9H2L5 321 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 GPR84Q9NQS5 396 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 SLC22A13Q9Y226 551 aa16.33■□□□□ 0.2
HOXA9-202ENST00000396345 EXOSC1Q9Y3B2 195 aaKnown RBP16.33■□□□□ 0.2
HOXA9-202ENST00000396345 TTRP02766 147 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 MYL12AP19105 171 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 ETV1P50549 477 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 DSCR9P59020 149 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 TNFAIP6P98066 277 aaPredicted RBP16.32■□□□□ 0.2
HOXA9-202ENST00000396345 MED21Q13503 144 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 CARTPTQ16568 116 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 CLEC2AQ6UVW9 174 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 AHSA2Q719I0 299 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 ZNF540Q8NDQ6 660 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 PELI1Q96FA3 418 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 Q96MF0 132 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 EGLN1Q9GZT9 426 aa16.32■□□□□ 0.2
HOXA9-202ENST00000396345 ISG20L2Q9H9L3 353 aaKnown RBP16.32■□□□□ 0.2
HOXA9-202ENST00000396345 SAP30LQ9HAJ7 183 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms