RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZNF813Q6ZN06 617 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 SEM1Q6ZVN7 128 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 PLPP7Q8NBV4 271 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 OR8B12Q8NGG6 310 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 OR6M1Q8NGM8 313 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 C7orf50Q9BRJ6 194 aaKnown RBP13.21□□□□□ -0.3
SCAF11-204ENST00000395454 MARVELD1Q9BSK0 173 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 HDHD2Q9H0R4 259 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 RNF121Q9H920 327 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 MBD3L4A6NDZ8 208 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 MBD3L3A6NE82 208 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 MBD3L5A6NJ08 208 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 H3BSH0 61 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 GABARAPH6UMI1 98 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 LDLRAD4O15165 306 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 SYT7O43581 403 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 IL2RAP01589 272 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 TRAPPC2P0DI81 140 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 TRAPPC2BP0DI82 140 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 BTCP35070 178 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 CX3CR1P49238 355 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 INPP1P49441 399 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 PMPCAQ10713 525 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 GPR176Q14439 515 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 RSPO1Q2MKA7 263 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 KRTAP27-1Q3LI81 207 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 PLA1AQ53H76 456 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 NCCRP1Q6ZVX7 275 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 SERPINA12Q8IW75 414 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 TUSC5Q8IXB3 177 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 DTX3Q8N9I9 347 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 OR51A2Q8NGJ7 313 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 MBD3L2Q8NHZ7 208 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 PTX4Q96A99 478 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 FOXRED1Q96CU9 486 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF837Q96EG3 531 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 RBM24Q9BX46 236 aaKnown RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 DIDO1Q9BTC0 2240 aaKnown RBP13.2□□□□□ -0.3
SCAF11-204ENST00000395454 ADGRG4Q8IZF6 3080 aa13.2□□□□□ -0.3
SCAF11-204ENST00000395454 A0A0U1RQV5 110 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CCL21O00585 134 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 XRCC3O43542 346 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 LMX1BO60663 402 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 TOXO94900 526 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 GLI4P10075 376 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CRYGSP22914 178 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CDK2P24941 298 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 TIMP3P35625 211 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 DYRK1AQ13627 763 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-204ENST00000395454 TAF13Q15543 124 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 ELFN2Q5R3F8 820 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF57Q68EA5 555 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-204ENST00000395454 OR2A2Q6IF42 318 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 LINGO2Q7L985 606 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 FJX1Q86VR8 437 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 MMP28Q9H239 520 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 BCO1Q9HAY6 547 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF319Q9P2F9 582 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 MEMO1Q9Y316 297 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CACNG2Q9Y698 323 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 COL12A1Q99715 3063 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 A0A0B4J293 547 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 MEIOCA2RUB1 952 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 ZNF724A8MTY0 619 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 E9PLN8 166 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 APOC1P02654 83 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 HTR2CP28335 458 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 POU3F4P49335 361 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 PRKXP51817 358 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 RAB35Q15286 201 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 TMEM69Q5SWH9 247 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 PLET1Q6UQ28 207 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CDH26Q8IXH8 852 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CNEP1R1Q8N9A8 125 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 ADAT3Q96EY9 351 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-204ENST00000395454 GMPPAQ96IJ6 420 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-204ENST00000395454 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 VKORC1Q9BQB6 163 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
SCAF11-204ENST00000395454 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 CIB4A0PJX0 185 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 RPL36A-HNRNPH2H7BZ11 118 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 CTAG2O75638 210 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 YES1P07947 543 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 ANOS1P23352 680 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 CD300CQ08708 224 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 ECH1Q13011 328 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 C2orf76Q3KRA6 126 aa13.18□□□□□ -0.3
SCAF11-204ENST00000395454 DOK3Q7L591 496 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms