RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 GK2Q14410 553 aaPredicted RBP23.32■■□□□ 1.32
SSBP4-202ENST00000348495 CENPOQ9BU64 300 aa23.32■■□□□ 1.32
SSBP4-202ENST00000348495 REPIN1Q9BWE0 567 aaKnown RBP23.32■■□□□ 1.32
SSBP4-202ENST00000348495 SSR3Q9UNL2 185 aa23.32■■□□□ 1.32
SSBP4-202ENST00000348495 HEATR1Q9H583 2144 aaKnown RBP23.32■■□□□ 1.32
SSBP4-202ENST00000348495 LOC390937A0A1W2PQ73 354 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 J3QKU1 62 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 OCM2P0CE71 109 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 PPP1CBP62140 327 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 MALLQ13021 153 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 ZMAT1Q5H9K5 638 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 NCMAPQ5T1S8 102 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 RAB2BQ8WUD1 216 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 AKAP1Q92667 903 aaKnown RBP eCLIP23.31■■□□□ 1.32
SSBP4-202ENST00000348495 ISOC1Q96CN7 298 aa23.31■■□□□ 1.32
SSBP4-202ENST00000348495 FAM71F1Q96KD3 344 aaPredicted RBP23.31■■□□□ 1.32
SSBP4-202ENST00000348495 TXNL4BQ9NX01 149 aaKnown RBP23.31■■□□□ 1.32
SSBP4-202ENST00000348495 hCG_38984A0A1B0GV85 526 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ATP6V1G2-DDX39BF2Z307 99 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 GATBO75879 557 aaKnown RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ATE1O95260 518 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 NKX6-1P78426 367 aaPredicted RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 UNQ6126/PRO20091Q6UXV3 157 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 CEACAM19Q7Z692 300 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 COMMD2Q86X83 199 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ACBD4Q8NC06 268 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 CCDC54Q8NEL0 328 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 OR14K1Q8NGZ2 314 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 SSC4DQ8WTU2 575 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 DERL3Q96Q80 235 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 BCL2L14Q9BZR8 327 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 PPIL3Q9H2H8 161 aaKnown RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ESRP2Q9H6T0 727 aaKnown RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 KLF2Q9Y5W3 355 aaPredicted RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 V9GYS6 101 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 TRBV5-7A0A0A0MS05 114 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 LOC100506127A0A0U1RQW1 187 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 DHRS3O75911 302 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 TUBG1P23258 451 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 CFL1P23528 166 aaKnown RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ERVS71-1P61550 626 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 FAM3AP98173 230 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 TNK1Q13470 666 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 C1orf174Q8IYL3 243 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 TSEN15Q8WW01 171 aaKnown RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 PHYHIPQ92561 330 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 BCL7BQ9BQE9 202 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 EXOSC4Q9NPD3 245 aaKnown RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 TUBG2Q9NRH3 451 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ZNF275Q9NSD4 429 aaPredicted RBP23.3■■□□□ 1.32
SSBP4-202ENST00000348495 PTTG3PQ9NZH4 202 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 CRIM1Q9NZV1 1036 aa23.3■■□□□ 1.32
SSBP4-202ENST00000348495 ABCD4O14678 606 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 PIN1P1O15428 100 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 LMX1BO60663 402 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 SOX2P48431 317 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 HLXQ14774 488 aaPredicted RBP23.29■■□□□ 1.32
SSBP4-202ENST00000348495 OR8B8Q15620 311 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 FBXW12Q6X9E4 464 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 DMRTC2Q8IXT2 367 aaPredicted RBP23.29■■□□□ 1.32
SSBP4-202ENST00000348495 OR1J1Q8NGS3 322 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 OPA3Q9H6K4 179 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 DHDHQ9UQ10 334 aa23.29■■□□□ 1.32
SSBP4-202ENST00000348495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 ZNF701M0R085 212 aaPredicted RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 SIAH2O43255 324 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 UCHL1P09936 223 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 ZNF12P17014 697 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 KIR2DL3P43628 341 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 GSK3AP49840 483 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 LSM3P62310 102 aaKnown RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 FAM27D1Q5T7N8 215 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 C22orf42Q6IC83 251 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 OR13C3Q8NGS6 347 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 SLC25A40Q8TBP6 338 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 THRSPQ92748 146 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 TMEM106AQ96A25 262 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 PLPPR2Q96GM1 343 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 MARS2Q96GW9 593 aaKnown RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 OR2J1Q9GZK6 312 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 RNF167Q9H6Y7 350 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 DHRS7CA6NNS2 312 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 DEFB108AA8MXU0 73 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 MTRF1O75570 445 aaKnown RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 ACKR3P25106 362 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 MAPK3P27361 379 aaPredicted RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 BEX5Q5H9J7 111 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 SPATA46Q5T0L3 261 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 PAMR1Q6UXH9 720 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 PGAP1Q75T13 922 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 DGCR14Q96DF8 476 aaKnown RBP23.28■■□□□ 1.32
SSBP4-202ENST00000348495 FAM192AQ9GZU8 254 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 SPEF1Q9Y4P9 236 aa23.28■■□□□ 1.32
SSBP4-202ENST00000348495 H3BMQ9 156 aa23.27■■□□□ 1.32
SSBP4-202ENST00000348495 RAF1P04049 648 aa23.27■■□□□ 1.32
SSBP4-202ENST00000348495 PRSS12P56730 875 aa23.27■■□□□ 1.32
SSBP4-202ENST00000348495 NCS1P62166 190 aa23.27■■□□□ 1.32
SSBP4-202ENST00000348495 SNTB2Q13425 540 aaKnown RBP23.27■■□□□ 1.32
SSBP4-202ENST00000348495 MRPL21Q7Z2W9 205 aaKnown RBP23.27■■□□□ 1.32
SSBP4-202ENST00000348495 NUP37Q8NFH4 326 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms