RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PHYHO14832 338 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 PLPP2O43688 288 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 SRSF10O75494 262 aaKnown RBP12.87□□□□□ -0.35
CXCL12-201ENST00000343575 PNPP00491 289 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 DNASE1P24855 282 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 BTCP35070 178 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF84P51523 738 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 TAS2R43P59537 309 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 HIST1H3AP68431 136 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 DYRK1AQ13627 763 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 HIST2H3PS2Q5TEC6 136 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 BTN2A1Q7KYR7 527 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF627Q7L945 461 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF100Q8IYN0 542 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 OR56B4Q8NH76 319 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 CCDC120Q96HB5 630 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 TRIM36Q9NQ86 728 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 C12orf4Q9NQ89 552 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 NUDT15Q9NV35 164 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 IKZF2Q9UKS7 526 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 USP24Q9UPU5 2620 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 OR6C65A6NJZ3 312 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 NCR1O76036 304 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 IL18BPO95998 194 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 PAHP00439 452 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 CGAP01215 116 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 ABOP16442 354 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 MMP15P51511 669 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 GBX2P52951 348 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-201ENST00000343575 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
CXCL12-201ENST00000343575 EXOSC2Q13868 293 aaKnown RBP12.86□□□□□ -0.35
CXCL12-201ENST00000343575 INSL4Q14641 139 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 CDK5R1Q15078 307 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 C9orf135Q5VTT2 229 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 FBXW9Q5XUX1 488 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 TMEM91Q6ZNR0 172 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 SLC22A24Q8N4F4 322 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 UXS1Q8NBZ7 420 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 RBPMSQ93062 196 aaKnown RBP12.86□□□□□ -0.35
CXCL12-201ENST00000343575 SLAMF6Q96DU3 332 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 LRP12Q9Y561 859 aa12.86□□□□□ -0.35
CXCL12-201ENST00000343575 ANKRD61A6NGH8 418 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 TTLL8A6PVC2 850 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 DVL2O14641 736 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 UBL3O95164 117 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ITGA5P08648 1049 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ZP3P21754 424 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 PTGER4P35408 488 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 STK11Q15831 433 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 RSPO1Q2MKA7 263 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 OR7E24Q6IFN5 339 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 KLHL24Q6TFL4 600 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 SKA3Q8IX90 412 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 C1orf198Q9H425 327 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 POLEQ07864 2286 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 SHISA3A0PJX4 238 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 CTDSPLO15194 276 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 KRT33AO76009 404 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 H2AFB2P0C5Z0 115 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 CD8BP10966 210 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ANOS1P23352 680 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 TIMP3P35625 211 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF81P51508 661 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 MADCAM1Q13477 382 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 LGALSLQ3ZCW2 172 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 OR2A2Q6IF42 318 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 KCTD18Q6PI47 426 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ARL9Q6T311 187 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 PRSS35Q8N3Z0 413 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 DLL4Q9NR61 685 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 PLSCR4Q9NRQ2 329 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 TINAGQ9UJW2 476 aa12.85□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 M0R233 179 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 TMEM127O75204 238 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 CST2P09228 141 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 GLI4P10075 376 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms