RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 LRRC30A6NM36 301 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 ANKRD30BLA7E2S9 258 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 HCCSP53701 268 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 CXCR4P61073 352 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 RCN1Q15293 331 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 AVPI1Q5T686 147 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 MEDAGQ5VYS4 303 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 FAM166AQ6J272 317 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 ZNF322Q6U7Q0 402 aaPredicted RBP16.25■□□□□ 0.19
SYNE4-202ENST00000340477 ZNF679Q8IYX0 411 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 OR56B2PQ8NGI1 322 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 SPSB4Q96A44 273 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 RAB39BQ96DA2 213 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 MEGF10Q96KG7 1140 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 OR8B4Q96RC9 309 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 C8orf4Q9NR00 106 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 TMEM106BQ9NUM4 274 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 KCNS2Q9ULS6 477 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 WIPI2Q9Y4P8 454 aa16.25■□□□□ 0.19
SYNE4-202ENST00000340477 ACOD1A6NK06 481 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 INAFM1C9JVW0 142 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 F5H5P2 479 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 MLNRO43193 412 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 MPZL2O60487 215 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 GMDSO60547 372 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 SBK2P0C263 348 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 IRF2P14316 349 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 CA6P23280 308 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 DCTDP32321 178 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 GNALP38405 381 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 CDH15P55291 814 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 ROM1Q03395 351 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 KLBQ86Z14 1044 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 CELF2-AS1Q8N7Q2 184 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 SPERTQ8NA61 448 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 ZNF555Q8NEP9 628 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 CSNK2A3Q8NEV1 391 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 CLDND2Q8NHS1 167 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 RDH12Q96NR8 316 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 MBOAT4Q96T53 435 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 GAL3ST1Q99999 423 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 TTTY10Q9BZA0 68 aa16.24■□□□□ 0.19
SYNE4-202ENST00000340477 TMEM269A0A1B0GVZ9 245 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 H0YL77 283 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 PSMD9O00233 223 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 HLA-DPB1P04440 258 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 KRT8P05787 483 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 ANPEPP15144 967 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 SNRPGP62308 76 aaKnown RBP16.23■□□□□ 0.19
SYNE4-202ENST00000340477 EGR3Q06889 387 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 PRSS45Q7RTY3 260 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 COMMD2Q86X83 199 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 C1orf87Q8N0U7 546 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 LINC01356Q8N9X3 169 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 OR10H4Q8NGA5 316 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 OR11L1Q8NGX0 322 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 ERGIC1Q969X5 290 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 SGK3Q96BR1 496 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 MSI2Q96DH6 328 aaKnown RBP16.23■□□□□ 0.19
SYNE4-202ENST00000340477 SLC29A1Q99808 456 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 MOB1AQ9H8S9 216 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 SMPD3Q9NY59 655 aaPredicted RBP16.23■□□□□ 0.19
SYNE4-202ENST00000340477 GTF2A1LQ9UNN4 478 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 COPS3Q9UNS2 423 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 NPTNQ9Y639 398 aa16.23■□□□□ 0.19
SYNE4-202ENST00000340477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■■■ 27.4
SYNE4-202ENST00000340477 hCG_38984A0A1B0GV85 526 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 A0A1B0GWJ7 208 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 C5orf63A6NC05 138 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 TGFAP01135 160 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 OR2T7P0C7T2 308 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 PCMT1P22061 227 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 CD200P41217 278 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 GSK3AP49840 483 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 MMP16P51512 607 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 ACTC1P68032 377 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 ACTA1P68133 377 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 FAM3AP98173 230 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 SPRNQ5BIV9 151 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 FAM220AQ7Z4H9 259 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 MOGAT3Q86VF5 341 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 SPICQ8N5J4 248 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 OR2T27Q8NH04 317 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 OR8S1Q8NH09 359 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 Q96MT0 163 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 TBX5Q99593 518 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 GCM1Q9NP62 436 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 C14orf119Q9NWQ9 140 aa16.22■□□□□ 0.19
SYNE4-202ENST00000340477 B4DSR2 109 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 LMX1BO60663 402 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 HNF1AP20823 631 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 IL2RGP31785 369 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 MTNR1AP48039 350 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 OCLNQ16625 522 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 SLC25A30Q5SVS4 291 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 MUC20Q8N307 709 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-202ENST00000340477 OR8B12Q8NGG6 310 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 MYCBPQ99417 103 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-202ENST00000340477 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
SYNE4-202ENST00000340477 PAPOLGQ9BWT3 736 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms