RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 INO80CQ6PI98 192 aaPredicted RBP16.04■□□□□ 0.16
USP39-201ENST00000323701 DOK3Q7L591 496 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 TRIM63Q969Q1 353 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 SARAFQ96BY9 339 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 ABCG5Q9H222 651 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 IGKV1-9A0A0C4DH69 117 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 MKRN2OSH3BPM6 223 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 EEF1E1O43324 174 aaKnown RBP16.04■□□□□ 0.16
USP39-201ENST00000323701 CDK2P24941 298 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 HTR2CP28335 458 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 OR3A2P47893 321 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 PCBD1P61457 104 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 FOXF2Q12947 444 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 OR10K2Q6IF99 312 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 DRAM2Q6UX65 266 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 CNTD2Q9H8S5 307 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 LOC390937A0A1W2PQ73 354 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 FAHP16930 419 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ZNF20P17024 532 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ACKR3P25106 362 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 BDKRB2P30411 391 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 PTH2RP49190 550 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ECH1Q13011 328 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 TNK1Q13470 666 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ACSF3Q4G176 576 aaPredicted RBP16.03■□□□□ 0.16
USP39-201ENST00000323701 GLT8D1Q68CQ7 371 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 OR5D14Q8NGL3 314 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 THAP7Q9BT49 309 aaPredicted RBP16.03■□□□□ 0.16
USP39-201ENST00000323701 RNF121Q9H920 327 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 INTS1Q8N201 2190 aaKnown RBP16.03■□□□□ 0.16
USP39-201ENST00000323701 TMEM272A0A1B0GTI8 110 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 KDM4BO94953 1096 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 UBL3O95164 117 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 LCATP04180 440 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 CD3GP09693 182 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 SDHBP21912 280 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 KIR2DL2P43627 348 aaPredicted RBP16.03■□□□□ 0.16
USP39-201ENST00000323701 ART1P52961 327 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 DEFA1P59665 94 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 DEFA3P59666 94 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ASAH1Q13510 395 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 PYHIN1Q6K0P9 492 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ZNF585AQ6P3V2 769 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 VWA1Q6PCB0 445 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 TFAP2EQ6VUC0 442 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 SEM1Q6ZVN7 128 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 HAVCR1Q96D42 359 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 CMTM3Q96MX0 182 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 AUNIPQ9H7T9 357 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 GP6Q9HCN6 339 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 TMEM138Q9NPI0 162 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 ZNF71Q9NQZ8 489 aaPredicted RBP16.03■□□□□ 0.16
USP39-201ENST00000323701 ETV7Q9Y603 341 aa16.03■□□□□ 0.16
USP39-201ENST00000323701 PRR14LQ5THK1 2151 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 CD79AP11912 226 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 SRP9P49458 86 aaKnown RBP16.02■□□□□ 0.16
USP39-201ENST00000323701 STK11Q15831 433 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 C1orf100Q5SVJ3 147 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 TRIQKQ629K1 86 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 CRIP3Q6Q6R5 217 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 FAM214BQ7L5A3 538 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 AKAP14Q86UN6 197 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 GLCCI1Q86VQ1 547 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 ZNF584Q8IVC4 421 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 RAXQ9Y2V3 346 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 V9GYS6 101 aa16.02■□□□□ 0.16
USP39-201ENST00000323701 TMEM127O75204 238 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 DHRS3O75911 302 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 EDN3P14138 238 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 RAB3AP20336 220 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 KCNJ8Q15842 424 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 SLC36A2Q495M3 483 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 RPRMLQ8N4K4 120 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 CNEP1R1Q8N9A8 125 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 OR1K1Q8NGR3 316 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 SETD6Q8TBK2 473 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 YIPF5Q969M3 257 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 GAL3ST1Q99999 423 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 POU2F3Q9UKI9 436 aa16.02■□□□□ 0.15
USP39-201ENST00000323701 NBEAQ8NFP9 2946 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 LOC100289279A0A1B0GTE1 492 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 MEGF11A6BM72 1044 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 SULT1B1O43704 296 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 MPGP29372 298 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 RAB1AP62820 205 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 Q6ZSR3 168 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 OR52H1Q8NGJ2 320 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 OR6M1Q8NGM8 313 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 NPRL2Q8WTW4 380 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 BCL2L2Q92843 193 aaPredicted RBP16.01■□□□□ 0.15
USP39-201ENST00000323701 MS4A3Q96HJ5 214 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 REEP6Q96HR9 211 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 MRI1Q9BV20 369 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 OR10A2Q9H208 303 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 PLEKHA1Q9HB21 404 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 PIGLQ9Y2B2 252 aa16.01■□□□□ 0.15
USP39-201ENST00000323701 CTAG2O75638 210 aa16■□□□□ 0.15
USP39-201ENST00000323701 APOC1P02654 83 aa16■□□□□ 0.15
USP39-201ENST00000323701 ARSBP15848 533 aa16■□□□□ 0.15
USP39-201ENST00000323701 S100A1P23297 94 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms