RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PUSL1Q8N0Z8 303 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 AKR1E2Q96JD6 320 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF2Q9BSG1 426 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ADAT1Q9BUB4 502 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 NKX2-4Q9H2Z4 354 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 TMEM74BQ9NUR3 256 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 OR6C65A6NJZ3 312 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ASAH2BP0C7U1 165 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 GLI4P10075 376 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 MPGP29372 298 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 CLDN17P56750 224 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 RAB32Q13637 225 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ST8SIA1Q92185 356 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF426Q9BUY5 554 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 CHRDQ9H2X0 955 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 MRPS18BQ9Y676 258 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF217O75362 1048 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 LYPD3O95274 346 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 SFT2D2O95562 160 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 ABOP16442 354 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 OMGP23515 440 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 MEOX2P50222 304 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 NKX6-1P78426 367 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 MGAT2Q10469 447 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 GUCA2BQ16661 112 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 P4HA3Q7Z4N8 544 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 SKA3Q8IX90 412 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 LRRC18Q8N456 261 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 OR4D6Q8NGJ1 314 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 GPBAR1Q8TDU6 330 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 PIK3IP1Q96FE7 263 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 PBX4Q9BYU1 374 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 FGF21Q9NSA1 209 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 FBXO7Q9Y3I1 522 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 A0A1W2PPC1 479 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 DDAH2O95865 285 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 CELA2BP08218 269 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 OR13C7P0DN81 318 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 OR2B8PP59922 312 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 UBE2KP61086 200 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 SNRPEP62304 92 aaKnown RBP11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 C1orf53Q5VUE5 145 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 TFAP2EQ6VUC0 442 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF561Q8N587 486 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 WWTR1Q9GZV5 400 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 KLK13Q9UKR3 277 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 PADI1Q9ULC6 663 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 SPTY2D1-AS1A0A0U1RR47 76 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 ALG1L2C9J202 215 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 TXNDC12O95881 172 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 TUBG1P23258 451 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 FPR2P25090 351 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 ACY1Q03154 408 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 MFAP5Q13361 173 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 CLINT1Q14677 625 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 PCK2Q16822 640 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 PHLDA2Q53GA4 152 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 THEM4Q5T1C6 240 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 ATRAIDQ6UW56 229 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 LINC00518Q8N0U6 118 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 ZNF286AQ9HBT8 521 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 RARRES3Q9UL19 164 aa11.4□□□□□ -0.58
DNMT3A-202ENST00000321117 C9J4A7 227 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 UMAD1C9J7I0 102 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC33A1O00400 549 aaPredicted RBP11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 ZFAND5O76080 213 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 PTAFRP25105 342 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 RFC3P40938 356 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 GRB2P62993 217 aaKnown RBP11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 S100A12P80511 92 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 CNN3Q15417 329 aaKnown RBP11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 PNLIPRP3Q17RR3 467 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 FBXO46Q6PJ61 603 aaPredicted RBP11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 SPRED2Q7Z698 418 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 SFTPA2Q8IWL1 248 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC30A7Q8NEW0 376 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 KIRREL1Q96J84 757 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC22A11Q9NSA0 550 aa11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 TMEM184BQ9Y519 407 aaPredicted RBP11.4□□□□□ -0.59
DNMT3A-202ENST00000321117 MAP1BP46821 2468 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 PLPP3O14495 311 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 TO15178 435 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 MBTPS2O43462 519 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 ADAM11O75078 769 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 CD37P11049 281 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 ZNF16P17020 682 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 ABCD3P28288 659 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 MALLQ13021 153 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 JMJD6Q6NYC1 403 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 ADAD2Q8NCV1 583 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 OR13C8Q8NGS7 320 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 ULBP2Q9BZM5 246 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 PLEKHA2Q9HB19 425 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 ALKBH4Q9NXW9 302 aa11.39□□□□□ -0.59
DNMT3A-202ENST00000321117 SCN5AQ14524 2016 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms