RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ZNF703Q9H7S9 590 aaPredicted RBP4.35□□□□□ -1.71
CAST-201ENST00000309190 SEPSECSQ9HD40 501 aaKnown RBP4.35□□□□□ -1.71
CAST-201ENST00000309190 KLHDC2Q9Y2U9 406 aa4.35□□□□□ -1.71
CAST-201ENST00000309190 PLXNB1O43157 2135 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 MEIKINA0A087WXM9 373 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 PAHP00439 452 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 CFDP00746 253 aaPredicted RBP4.34□□□□□ -1.71
CAST-201ENST00000309190 IGHEP01854 428 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 GLI4P10075 376 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 CASP6P55212 293 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 RAB1AP62820 205 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
CAST-201ENST00000309190 RAB40BQ12829 278 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 RTP5Q14D33 572 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ZNF141Q15928 474 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 CLLU1Q5K131 121 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ZCCHC12Q6PEW1 402 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ZNF322Q6U7Q0 402 aaPredicted RBP4.34□□□□□ -1.71
CAST-201ENST00000309190 DMBX1Q8NFW5 382 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 OR5H6Q8NGV6 325 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 NEK7Q8TDX7 302 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 PIGCQ92535 297 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 LRFN5Q96NI6 719 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 SPRY4Q9C004 299 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 SLC22A4Q9H015 551 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 SLC26A1Q9H2B4 701 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 CHST11Q9NPF2 352 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 TIGARQ9NQ88 270 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 MRPL39Q9NYK5 338 aaKnown RBP4.34□□□□□ -1.71
CAST-201ENST00000309190 IL20Q9NYY1 176 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 COPS3Q9UNS2 423 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 TRAV39A0A0B4J263 110 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 A0A1W2PRD5 423 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 A0A1W2PRF3 423 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 A0A1W2PRM7 423 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 PLSCR5A0PG75 271 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 LIPT2A6NK58 231 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 PROB1E7EW31 1015 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 OR2A4O95047 310 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 SPI1P17947 270 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ANOS1P23352 680 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 MYL9P24844 172 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 CCR9P51686 369 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 RAB25P57735 213 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.34□□□□□ -1.71
CAST-201ENST00000309190 GSG1Q2KHT4 349 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ZFP69Q49AA0 526 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 FAM201AQ5SY85 155 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 C22orf34Q6ZV56 151 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 BIVMQ86UB2 503 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 C20orf196Q8IYI0 205 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 OR9K2Q8NGE7 335 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 C11orf40Q8WZ69 217 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 HAS2Q92819 552 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 YIPF5Q969M3 257 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 MCHR2Q969V1 340 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ZFP3Q96NJ6 502 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 OR2A7Q96R45 310 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 BEX2Q9BXY8 128 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 ESRP2Q9H6T0 727 aaKnown RBP4.34□□□□□ -1.71
CAST-201ENST00000309190 BEX1Q9HBH7 125 aa4.34□□□□□ -1.71
CAST-201ENST00000309190 TMEM269A0A1B0GVZ9 245 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 MS4A18H0YCH9 400 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 BHLHE40O14503 412 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 CASKO14936 926 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 ANGPTL7O43827 346 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 ABHD16AO95870 558 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 IGHG1P01857 330 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 THBS1P07996 1170 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 ZNF32P17041 273 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 TALDO1P37837 337 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 HTR2BP41595 481 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 WNT4P56705 351 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 CNN3Q15417 329 aaKnown RBP4.34□□□□□ -1.72
CAST-201ENST00000309190 MS4A18Q3C1V0 323 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 TIMM50Q3ZCQ8 353 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 HSD17B12Q53GQ0 312 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 LYPD6Q86Y78 171 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 C17orf47Q8NEP4 570 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 OR8J1Q8NGP2 316 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 OR13C9Q8NGT0 318 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 ZNF671Q8TAW3 534 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 ABHD4Q8TB40 342 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 NR4A3Q92570 626 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 SNAPC3Q92966 411 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 COQ7Q99807 217 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 CGGBP1Q9UFW8 167 aaPredicted RBP4.34□□□□□ -1.72
CAST-201ENST00000309190 ST6GALNAC2Q9UJ37 374 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 NUP50Q9UKX7 468 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 RCE1Q9Y256 329 aa4.34□□□□□ -1.72
CAST-201ENST00000309190 YLPM1P49750 1951 aaKnown RBP4.34□□□□□ -1.72
CAST-201ENST00000309190 LOC102723996A0A087X1L8 192 aa4.33□□□□□ -1.72
CAST-201ENST00000309190 TUBAL3A6NHL2 446 aa4.33□□□□□ -1.72
CAST-201ENST00000309190 PLPP3O14495 311 aa4.33□□□□□ -1.72
CAST-201ENST00000309190 PLPP2O43688 288 aa4.33□□□□□ -1.72
CAST-201ENST00000309190 ELK1P19419 428 aa4.33□□□□□ -1.72
CAST-201ENST00000309190 SDC2P34741 201 aa4.33□□□□□ -1.72
CAST-201ENST00000309190 MTNR1BP49286 362 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms