RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GLO1Q04760 184 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 RUNX3Q13761 415 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 HSD17B11Q8NBQ5 300 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 DMBX1Q8NFW5 382 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 RAB3CQ96E17 227 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 CACFD1Q9UGQ2 172 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 UBE2CO00762 179 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 APODP05090 189 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 IL11P20809 199 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 RPL12P30050 165 aaKnown RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 KIAA0141Q14154 515 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 NAXEQ8NCW5 288 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 NMES1Q9C002 83 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 R4GMQ9 66 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 XRCC2O43543 280 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 RNF224P0DH78 156 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 DVL1P1P54792 670 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 TAS2R31P59538 309 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 NAAAQ02083 359 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 SRSF4Q08170 494 aaKnown RBP13.07□□□□□ -0.32
COL6A2-201ENST00000300527 TMEM230Q96A57 120 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 TBL1XR1Q9BZK7 514 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 MED29Q9NX70 200 aa13.07□□□□□ -0.32
COL6A2-201ENST00000300527 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 A0A0J9YY10 115 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 SLC33A1O00400 549 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-201ENST00000300527 HEXAP06865 529 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 KLK3P07288 261 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-201ENST00000300527 BCKDHBP21953 392 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF93P35789 620 aaPredicted RBP13.06□□□□□ -0.32
COL6A2-201ENST00000300527 RNF212Q495C1 297 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 ACTBL2Q562R1 376 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 KLHL24Q6TFL4 600 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 SFT2D2O95562 160 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 IL12BP29460 328 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 RBMXP38159 391 aaKnown RBP13.06□□□□□ -0.32
COL6A2-201ENST00000300527 EIF5AP63241 154 aaKnown RBP13.06□□□□□ -0.32
COL6A2-201ENST00000300527 DEFA6Q01524 100 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF117Q03924 483 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF440Q8IYI8 595 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 OR10H5Q8NGA6 315 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 SLAMF9Q96A28 289 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 C5orf34Q96MH7 638 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 ASB16Q96NS5 453 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 SLC5A7Q9GZV3 580 aa13.06□□□□□ -0.32
COL6A2-201ENST00000300527 GP1BBP13224 206 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 GUK1Q16774 197 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 EMC4Q5J8M3 183 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 MFSD8Q8NHS3 518 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 OR51E1Q8TCB6 317 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 C2orf50Q96LR7 162 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 PIGQQ9BRB3 760 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 TCEAL7Q9BRU2 100 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 SLC2A8Q9NY64 477 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 PCOLCE2Q9UKZ9 415 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
COL6A2-201ENST00000300527 MFNGO00587 321 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 DIRAS3O95661 229 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 IFNA2P01563 188 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 HLA-GP17693 338 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 GPR3P46089 330 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF529Q6P280 563 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 OR9K2Q8NGE7 335 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 ARHGAP5-AS1Q96IT6 56 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 KCNJ16Q9NPI9 418 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 SOHLH2Q9NX45 425 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 B4DGG1 531 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 AP4M1O00189 453 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
COL6A2-201ENST00000300527 IGFBP3P17936 291 aaPredicted RBP13.05□□□□□ -0.32
COL6A2-201ENST00000300527 S100A2P29034 98 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 OR3A4PP47883 348 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 TMEM33P57088 247 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 SP6Q3SY56 376 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF248Q8NDW4 579 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 SLC26A10Q8NG04 563 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
COL6A2-201ENST00000300527 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 TBX21Q9UL17 535 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
COL6A2-201ENST00000300527 RHBDD3Q9Y3P4 386 aa13.05□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF727A8MUV8 499 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 YKT6O15498 198 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 ZNF217O75362 1048 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 TXNDC12O95881 172 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 FCGR3AP08637 254 aa13.04□□□□□ -0.32
COL6A2-201ENST00000300527 SULT1A1P50225 295 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms