RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SVILO95425 2214 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 PAHP00439 452 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 CALCBP10092 127 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 CD37P11049 281 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 SNRPBP14678 240 aaKnown RBP11.3□□□□□ -0.6
VAMP7-201ENST00000262640 BDKRB2P30411 391 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 THBS4P35443 961 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 PMPCAQ10713 525 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 GLYATL3Q5SZD4 288 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 LRRC28Q86X40 367 aaPredicted RBP11.3□□□□□ -0.6
VAMP7-201ENST00000262640 ZNF75AQ96N20 296 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 OBP2BQ9NPH6 170 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 TMEM138Q9NPI0 162 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 STEAP1Q9UHE8 339 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 V9GYH0 126 aa11.3□□□□□ -0.6
VAMP7-201ENST00000262640 ERCC1P07992 297 aaPredicted RBP11.29□□□□□ -0.6
VAMP7-201ENST00000262640 CCNOP22674 350 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 EVX1P49640 407 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SCAND1P57086 179 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SPOCK1Q08629 439 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 METAP1DQ6UB28 335 aaPredicted RBP11.29□□□□□ -0.6
VAMP7-201ENST00000262640 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
VAMP7-201ENST00000262640 OR51A2Q8NGJ7 313 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 OR2AE1Q8NHA4 323 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 LGALS14Q8TCE9 139 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 FOXRED1Q96CU9 486 aaPredicted RBP11.29□□□□□ -0.6
VAMP7-201ENST00000262640 CMTM3Q96MX0 182 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 A0A0B4J203 849 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 A6NIN4 97 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 FAM25AB3EWG3 89 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 FAM25CB3EWG5 89 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 FAM25GB3EWG6 89 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SLC17A2O00624 439 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 MSTNO14793 375 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SULT1B1O43704 296 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 TSC22D1Q15714 1073 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 RAB11BQ15907 218 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 TBC1D28Q2M2D7 210 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 FAM131AQ6UXB0 335 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SLC30A7Q8NEW0 376 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SEMA6DQ8NFY4 1073 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 OR13C9Q8NGT0 318 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 PP6455Q8WZ26 134 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 SPSB4Q96A44 273 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 APOBEC3DQ96AK3 386 aaPredicted RBP11.29□□□□□ -0.6
VAMP7-201ENST00000262640 ETV7Q9Y603 341 aa11.29□□□□□ -0.6
VAMP7-201ENST00000262640 CHD8Q9HCK8 2581 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 APOA1P02647 267 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 CCL2P13500 99 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 CBR1P16152 277 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ELK1P19419 428 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 PTBP1P26599 531 aaKnown RBP eCLIP11.28□□□□□ -0.63e-6■■■■■ 32.3
VAMP7-201ENST00000262640 MAP2K3P46734 347 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 CYSLTR2Q9NS75 346 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ZNF629Q9UEG4 869 aaPredicted RBP11.28□□□□□ -0.6
VAMP7-201ENST00000262640 PIGLQ9Y2B2 252 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 A0A0G2JNJ9 132 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 EIF4EP06730 217 aaKnown RBP11.28□□□□□ -0.6
VAMP7-201ENST00000262640 TALDO1P37837 337 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 CASP6P55212 293 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 RIPPLY1Q0D2K3 151 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 MALLQ13021 153 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 FAM166AQ6J272 317 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
VAMP7-201ENST00000262640 UTS2BQ765I0 119 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 CDH26Q8IXH8 852 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ST6GALNAC3Q8NDV1 305 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 OR6M1Q8NGM8 313 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 ITFG2Q969R8 447 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 SOSTQ9BQB4 213 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 Q9UFV3 132 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 AMDHD2Q9Y303 409 aa11.28□□□□□ -0.6
VAMP7-201ENST00000262640 hCG_38984A0A1B0GV85 526 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 A0A1W2PR80 420 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 J3QW42 95 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 ALX3O95076 343 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 FAHP16930 419 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 IL32P24001 234 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 CLDN12P56749 244 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 ZNF92Q03936 586 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 MRPL49Q13405 166 aaKnown RBP11.27□□□□□ -0.61
VAMP7-201ENST00000262640 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 TMEM211Q6ICI0 200 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 XKRXQ6PP77 449 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 JAGN1Q8N5M9 183 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 VKORC1Q9BQB6 163 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 CCDC32Q9BV29 185 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
VAMP7-201ENST00000262640 OPA3Q9H6K4 179 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms