RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-215	ENST00000597649	RERGL	Q9H628	205 aa		13.81	□□□□□ -0.2
SHKBP1-215	ENST00000597649	TANC2	Q9HCD6	1990 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	MDFIC2	A0A1B0GVS7	189 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	PRSS37	A4D1T9	235 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649		A8MXK9	166 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CASQ2	O14958	399 aa	Predicted RBP	13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CDKN2A	P42771	156 aa	Known RBP	13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	GUCA1A	P43080	201 aa	Predicted RBP	13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CDK5	Q00535	292 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	TMEM155	Q4W5P6	130 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	TMEM236	Q5W0B7	351 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	C16orf87	Q6PH81	154 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649		Q6ZR03	302 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	C9orf139	Q6ZV77	190 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	KLHL36	Q8N4N3	616 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SPIC	Q8N5J4	248 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SDR9C7	Q8NEX9	313 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	NSMAF	Q92636	917 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	DIRC2	Q96SL1	478 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	NMNAT3	Q96T66	252 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	MRI1	Q9BV20	369 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	GABARAPL3	Q9BY60	117 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	KCNN2	Q9H2S1	579 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	VCX3B	Q9H321	246 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	POFUT1	Q9H488	388 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SLC25A19	Q9HC21	320 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	TVP23B	Q9NYZ1	205 aa		13.8	□□□□□ -0.2
SHKBP1-215	ENST00000597649	ICMT	O60725	284 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	ZNF3	P17036	446 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	BTG1	P62324	171 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SNAPC1	Q16533	368 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	FAM27B	Q5VT28	67 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	DNM1P34	Q6PK57	102 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SLC25A47	Q6Q0C1	308 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	PTCHD4	Q6ZW05	846 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	OTULIN	Q96BN8	352 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	C4orf45	Q96LM5	186 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	OR2H1	Q9GZK4	316 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SYT4	Q9H2B2	425 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	TOR3A	Q9H497	397 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SMPD3	Q9NY59	655 aa	Predicted RBP	13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	MMP24	Q9Y5R2	645 aa		13.79	□□□□□ -0.2
SHKBP1-215	ENST00000597649	ZAR1L	A6NP61	321 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SLC16A7	O60669	478 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	KHDRBS3	O75525	346 aa	Known RBP	13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	WNT2	P09544	360 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	PAICS	P22234	425 aa	Known RBP	13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	LAP3	P28838	519 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CRABP1	P29762	137 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	POLR2I	P36954	125 aa	Known RBP	13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CENPA	P49450	140 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	ZNF774	Q6NX45	483 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SPATC1	Q76KD6	591 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	KIR3DL3	Q8N743	410 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SLC37A3	Q8NCC5	494 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	ZNF555	Q8NEP9	628 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	RDH12	Q96NR8	316 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	SRA1	Q9HD15	236 aa	Known RBP	13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CMC2	Q9NRP2	79 aa		13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	VSX1	Q9NZR4	365 aa	Predicted RBP	13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.78	□□□□□ -0.2
SHKBP1-215	ENST00000597649	CEACAM18	A8MTB9	384 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649		H3BSA7	217 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SURF4	O15260	269 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TIMM8A	O60220	97 aa	Predicted RBP	13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PLAT	P00750	562 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SCG5	P05408	212 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	EPHA2	P29317	976 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	MTNR1A	P48039	350 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CDC42	P60953	191 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SLX4IP	Q5VYV7	408 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	UNQ6126/PRO20091	Q6UXV3	157 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	NBEAL2	Q6ZNJ1	2754 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	C1orf174	Q8IYL3	243 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CYB561A3	Q8NBI2	242 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR2Z1	Q8NG97	314 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ITLN1	Q8WWA0	313 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	DACT3	Q96B18	629 aa	Predicted RBP	13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	UPRT	Q96BW1	309 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	NUAK2	Q9H093	628 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	RPRD1B	Q9NQG5	326 aa	Known RBP	13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TIMM10B	Q9Y5J6	103 aa		13.77	□□□□□ -0.21
SHKBP1-215	ENST00000597649		A0A1W2PPL8	197 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR6C68	A6NDL8	312 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FAM181B	A6NEQ2	426 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PRR23D1	E9PI22	279 aa	Predicted RBP	13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TMEM178B	H3BS89	294 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	HOXA3	O43365	443 aa	Predicted RBP	13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ZNF205	O95201	554 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CST2	P09228	141 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PPIAL4G	P0DN37	164 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	KRTAP10-3	P60369	221 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	RELB	Q01201	579 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CRMP1	Q14194	572 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ESCO2	Q56NI9	601 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	RHOU	Q7L0Q8	258 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	NPEPL1	Q8NDH3	523 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR2T4	Q8NH00	348 aa		13.76	□□□□□ -0.21

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