RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 OR4K13Q8NH42 304 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 TBC1D15Q8TC07 691 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 GATAD2BQ8WXI9 593 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 SLC22A4Q9H015 551 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 RASSF4Q9H2L5 321 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 EFCAB1Q9HAE3 211 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 ARGLU1Q9NWB6 273 aaPredicted RBP8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 NDUFAF4Q9P032 175 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 CTSZQ9UBR2 303 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 NOP16Q9Y3C1 178 aaKnown RBP8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 RNF114Q9Y508 228 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1.01
CHMP2A-202ENST00000596708 TRAV38-1A0A0B4J264 116 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 A0A1B0GWJ7 208 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 GGT3PA6NGU5 568 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 M0QZ24 198 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 M0R135 149 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 LGALS8O00214 317 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 NDUFAB1O14561 156 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 GMNNO75496 209 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 NDUFA7O95182 113 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 HIST1H1CP16403 213 aaKnown RBP8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 ZNF823P16415 610 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 SLC6A6P31641 620 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 RELBQ01201 579 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 TRAP1Q12931 704 aaKnown RBP8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 PDCD1Q15116 288 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 SEC23BQ15437 767 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 OCLNQ16625 522 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 RFX4Q33E94 735 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 KRTAP27-1Q3LI81 207 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 ZNF620Q6ZNG0 422 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 PNLDC1Q8NA58 520 aaKnown RBP8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 SCCPDHQ8NBX0 429 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 SLC26A10Q8NG04 563 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 FANK1Q8TC84 345 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 SSMEM1Q8WWF3 244 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 LHX4Q969G2 390 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 UBE2FQ969M7 185 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 SPTSSAQ969W0 71 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 ZNF799Q96GE5 643 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 WDFY2Q96P53 400 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 TBX15Q96SF7 602 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 CITED1Q99966 193 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 ADAT1Q9BUB4 502 aaKnown RBP8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 IFT27Q9BW83 186 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 TRIM15Q9C019 465 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 OR52D1Q9H346 318 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 FN3KQ9H479 309 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 TRIM36Q9NQ86 728 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 ACOXLQ9NUZ1 547 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 N6AMT1Q9Y5N5 214 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 POMT1Q9Y6A1 747 aa8.76□□□□□ -1.01
CHMP2A-202ENST00000596708 PLXNB1O43157 2135 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 IGHV1-69DA0A0B4J2H0 117 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 hCG_1807616A0A1W2PRN6 198 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 OOEPA6NGQ2 149 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 A6NLC8 198 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 CD300LBA8K4G0 201 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 ARPC3O15145 178 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 NDUFA2O43678 99 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 GMDSO60547 372 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 GADD45GO95257 159 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 IGHV1-69P01742 117 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 GYPAP02724 150 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 GRPP07492 148 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 MMP9P14780 707 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 NUDT2P50583 147 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 ARF6P62330 175 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 SPIBQ01892 262 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 ZNF92Q03936 586 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 ZBTB46Q86UZ6 589 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 PDZD9Q8IXQ8 264 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 LNX2Q8N448 690 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 SDR9C7Q8NEX9 313 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 OR2AE1Q8NHA4 323 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 DYRK2Q92630 601 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 MMP27Q9H306 513 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 C1orf123Q9NWV4 160 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 CYB5R1Q9UHQ9 305 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 SAMD4AQ9UPU9 718 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 V9GYQ6 96 aa8.75□□□□□ -1.01
CHMP2A-202ENST00000596708 A0A0G2JK05 382 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 OR6C68A6NDL8 312 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 OR10H3O60404 316 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 GPR137BO60478 399 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 CCDC22O60826 627 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 SMIM11AP58511 58 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 PSME3P61289 254 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 RPL15P61313 204 aaKnown RBP8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 MZT1Q08AG7 82 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 POU4F2Q12837 409 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 TAF13Q15543 124 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 SNAI3Q3KNW1 292 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 SLC35F1Q5T1Q4 408 aa8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 C8orf82Q6P1X6 216 aaPredicted RBP8.74□□□□□ -1.01
CHMP2A-202ENST00000596708 HACD2Q6Y1H2 254 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms