RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ADRA2CP18825 462 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 STOMP27105 288 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 PLP2Q04941 152 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 TSC22D1Q15714 1073 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 DOK3Q7L591 496 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 MDP1Q86V88 176 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 CXorf67Q86X51 503 aaPredicted RBP18.08■□□□□ 0.48
PNKP-203ENST00000593946 PLPP7Q8NBV4 271 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 ST6GALNAC3Q8NDV1 305 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 LYZL4Q96KX0 146 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 SLC30A2Q9BRI3 323 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 SOX7Q9BT81 388 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 SP140LQ9H930 580 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 AK6Q9Y3D8 172 aaKnown RBP18.08■□□□□ 0.48
PNKP-203ENST00000593946 A0A0G2JNJ9 132 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 CTDSP2O14595 271 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 IGFBP3P17936 291 aaPredicted RBP18.07■□□□□ 0.48
PNKP-203ENST00000593946 OPRM1P35372 400 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 UBE2NP61088 152 aaKnown RBP18.07■□□□□ 0.48
PNKP-203ENST00000593946 GFOD2Q3B7J2 385 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 SLC25A35Q3KQZ1 300 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 ZNF474Q6S9Z5 364 aaPredicted RBP18.07■□□□□ 0.48
PNKP-203ENST00000593946 Q6ZSR3 168 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 COMMD2Q86X83 199 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 PARP16Q8N5Y8 322 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 OR1J2Q8NGS2 313 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 POM121L2Q96KW2 1035 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 C1QTNF5Q9BXJ0 243 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 AKIP1Q9NQ31 210 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 Q9UFV3 132 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 SH3BGRL2Q9UJC5 107 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 FOXJ3Q9UPW0 622 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 PRR14LQ5THK1 2151 aa18.07■□□□□ 0.48
PNKP-203ENST00000593946 LCATP04180 440 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 EPXP11678 715 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 THBS2P35442 1172 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 COLCA1Q6ZS62 124 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 C17orf78Q8N4C9 275 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 FAM71F1Q96KD3 344 aaPredicted RBP18.06■□□□□ 0.48
PNKP-203ENST00000593946 MYO7BQ6PIF6 2116 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 MSTNO14793 375 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 SERPINA5P05154 406 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 ZNF12P17014 697 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 S100A5P33763 92 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 IDNKQ5T6J7 187 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 SGK3Q96BR1 496 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 FGGYQ96C11 551 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 KCTD12Q96CX2 325 aaKnown RBP18.06■□□□□ 0.48
PNKP-203ENST00000593946 ADAT3Q96EY9 351 aaPredicted RBP18.06■□□□□ 0.48
PNKP-203ENST00000593946 TAS2R4Q9NYW5 299 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 CKLFQ9UBR5 152 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 ZNF629Q9UEG4 869 aaPredicted RBP18.06■□□□□ 0.48
PNKP-203ENST00000593946 DAPK2Q9UIK4 370 aa18.06■□□□□ 0.48
PNKP-203ENST00000593946 COL6A6A6NMZ7 2263 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 C5orf49A4QMS7 147 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 ZNF14P17017 642 aaPredicted RBP18.05■□□□□ 0.48
PNKP-203ENST00000593946 WDR31Q8NA23 367 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 OR14K1Q8NGZ2 314 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 S100ZQ8WXG8 99 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 ACOT12Q8WYK0 555 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 WBP1Q96G27 269 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 MS4A3Q96HJ5 214 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 DMRTA2Q96SC8 542 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 VKORC1Q9BQB6 163 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 PIGMQ9H3S5 423 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 ZNF391Q9UJN7 358 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 V9GY05 133 aa18.05■□□□□ 0.48
PNKP-203ENST00000593946 DHRS3O75911 302 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 MAS1P04201 325 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 BMP4P12644 408 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 CCL2P13500 99 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 ATF1P18846 271 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 BMP5P22003 454 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 HOXC12P31275 282 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 NCCRP1Q6ZVX7 275 aaPredicted RBP18.04■□□□□ 0.48
PNKP-203ENST00000593946 BHLHA15Q7RTS1 189 aaPredicted RBP18.04■□□□□ 0.48
PNKP-203ENST00000593946 SERPINA12Q8IW75 414 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 MFSD4AQ8N468 514 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 CCDC54Q8NEL0 328 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 ZFAND2BQ8WV99 257 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 V9GYS6 101 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 KALRNO60229 2985 aa18.04■□□□□ 0.48
PNKP-203ENST00000593946 LOC390937A0A1W2PQ73 354 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 A0A1W2PR80 420 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 ANXA2P2A6NMY6 339 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 IFITM5A6NNB3 132 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 RGS5O15539 181 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 SLC2A2P11168 524 aaPredicted RBP18.03■□□□□ 0.48
PNKP-203ENST00000593946 APLNRP35414 380 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 GLYATL3Q5SZD4 288 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 DDI2Q5TDH0 399 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 LAX1Q8IWV1 398 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 OR2AE1Q8NHA4 323 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 REEP6Q96HR9 211 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 WDFY2Q96P53 400 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 RGCCQ9H4X1 137 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 HMG20AQ9NP66 347 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 OBP2BQ9NPH6 170 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 CMAHPQ9Y471 501 aa18.03■□□□□ 0.48
PNKP-203ENST00000593946 NBASA2RRP1 2371 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms