RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 PELI1Q96FA3 418 aa13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 SIGLEC11Q96RL6 698 aa13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 YTHDF1Q9BYJ9 559 aaKnown RBP13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 CCDC90BQ9GZT6 254 aa13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 MOB1AQ9H8S9 216 aa13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
RPRD1A-208ENST00000589050 A0A1W2PPW3 197 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 XRCC2O43543 280 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 MT-ND2P03891 347 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 SOD3P08294 240 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 HTR1AP08908 422 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 DANCRP0C864 163 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 GBX2P52951 348 aaPredicted RBP13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 GABARAPL2P60520 117 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 ZNF92Q03936 586 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 GK2Q14410 553 aaPredicted RBP13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 FBXW12Q6X9E4 464 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 MRPL21Q7Z2W9 205 aaKnown RBP13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 CATSPERDQ86XM0 798 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 OR52N1Q8NH53 320 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 GATAD2BQ8WXI9 593 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 PPP1R14AQ96A00 147 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 SGK3Q96BR1 496 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 REEP6Q96HR9 211 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 CDCA4Q9BXL8 241 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 LIME1Q9H400 295 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 G6PC2Q9NQR9 355 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 NUFIP1Q9UHK0 495 aaKnown RBP13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 LAMP3Q9UQV4 416 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 ERGIC3Q9Y282 383 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 LRCH1Q9Y2L9 728 aa13.27□□□□□ -0.29
RPRD1A-208ENST00000589050 IGLV3-9A0A075B6K5 115 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 TMEM129A0AVI4 362 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 B9A039 149 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 IGHV3-13P01766 116 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 RAC2P15153 192 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 PRSS12P56730 875 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 PSG7Q13046 419 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 MRPL28Q13084 256 aaKnown RBP13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 EFNB3Q15768 340 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 MST1LQ2TV78 715 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 WDR38Q5JTN6 314 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 RNLSQ5VYX0 342 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 PRSS48Q7RTY5 328 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 DTX2Q86UW9 622 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 PRSS35Q8N3Z0 413 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 NANOGP1Q8N7R0 232 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 RNF166Q96A37 237 aaPredicted RBP13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 SPSB4Q96A44 273 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 HAVCR1Q96D42 359 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 TRAF4Q9BUZ4 470 aaPredicted RBP13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 MND1Q9BWT6 205 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 RGCCQ9H4X1 137 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 CBLN4Q9NTU7 201 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 MYEF2Q9P2K5 600 aaKnown RBP13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 SLC22A13Q9Y226 551 aa13.26□□□□□ -0.29
RPRD1A-208ENST00000589050 A0A0U1RQV5 110 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 E9PI62 339 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 TIMM8AO60220 97 aaPredicted RBP13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 CD8AP01732 235 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 SELEP16581 610 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 CFL1P23528 166 aaKnown RBP13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 EVX1P49640 407 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 NANOS3P60323 173 aaKnown RBP13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 SNRPD2P62316 118 aaKnown RBP13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 IRF3Q14653 427 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 NKPD1Q17RQ9 610 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 SWI5Q1ZZU3 235 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 ALKBH6Q3KRA9 238 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 TMEM255AQ5JRV8 349 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 OR2T2Q6IF00 324 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 FDX2Q6P4F2 183 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 PAMR1Q6UXH9 720 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 COMMD2Q86X83 199 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 ELMOD2Q8IZ81 293 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 OR2G2Q8NGZ5 317 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 OR51E1Q8TCB6 317 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 HAVCR2Q8TDQ0 301 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 LURAP1Q96LR2 239 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 CCL19Q99731 98 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 OPA3Q9H6K4 179 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 BABAM2Q9NXR7 383 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 FRRS1LQ9P0K9 344 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 TAAR3PQ9P1P4 343 aa13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 PURGQ9UJV8 347 aaKnown RBP13.25□□□□□ -0.29
RPRD1A-208ENST00000589050 GGT3PA6NGU5 568 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 TTRP02766 147 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 KITLGP21583 273 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 ALDH3B1P43353 468 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 KIR3DL2P43630 455 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 CHN2P52757 468 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 WNT4P56705 351 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 ALKBH1Q13686 389 aaKnown RBP13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 MOGQ16653 247 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 ODF4Q2M2E3 257 aa13.24□□□□□ -0.29
RPRD1A-208ENST00000589050 C11orf71Q6IPW1 123 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms