RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 OR2T29Q8NH02 315 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 NEIL1Q96FI4 390 aaPredicted RBP13.3□□□□□ -0.28
CRLF3-203ENST00000578692 PLEKHA8Q96JA3 519 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 DGCR6LQ9BY27 220 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 SLC22A4Q9H015 551 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 REEP1Q9H902 201 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 ESM1Q9NQ30 184 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
CRLF3-203ENST00000578692 SAMHD1Q9Y3Z3 626 aaKnown RBP13.3□□□□□ -0.28
CRLF3-203ENST00000578692 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
CRLF3-203ENST00000578692 CD300LBA8K4G0 201 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 ZNF593O00488 134 aaPredicted RBP13.29□□□□□ -0.28
CRLF3-203ENST00000578692 GYPBP06028 91 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 PSKH1P11801 424 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 CALB2P22676 271 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 CA6P23280 308 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 CD80P33681 288 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 ENTPD1P49961 510 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 PRKXP51817 358 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 RAD23AP54725 363 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 ZNF92Q03936 586 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 TAF13Q15543 124 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 OR8G1Q15617 311 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 PCK2Q16822 640 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 KLF17Q5JT82 389 aaPredicted RBP13.29□□□□□ -0.28
CRLF3-203ENST00000578692 RBMS3Q6XE24 437 aaKnown RBP13.29□□□□□ -0.28
CRLF3-203ENST00000578692 OR2T33Q8NG76 320 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 OR11L1Q8NGX0 322 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 OR4Q3Q8NH05 313 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 NMNAT2Q9BZQ4 307 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 CENPMQ9NSP4 180 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 UFSP2Q9NUQ7 469 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 VNN3Q9NY84 501 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 ZNF69Q9UC07 566 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 NOP16Q9Y3C1 178 aaKnown RBP13.29□□□□□ -0.28
CRLF3-203ENST00000578692 ANK2Q01484 3957 aa13.29□□□□□ -0.28
CRLF3-203ENST00000578692 GGT3PA6NGU5 568 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 GMDSO60547 372 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 SOX14O95416 240 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 SPARCP09486 303 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 T-ENOLP0DO92 83 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 CLUP10909 449 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 SPI1P17947 270 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 SLC25A1P53007 311 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 PAX2Q02962 417 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 MPPED2Q15777 294 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 TEX30Q5JUR7 227 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 PRAMEF6Q5VXH4 476 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 BTNL3Q6UXE8 466 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 LRRN1Q6UXK5 716 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 SIGLECL1Q8N7X8 197 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 OR2AE1Q8NHA4 323 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 Q8TCH9 128 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 RAB40AQ8WXH6 277 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 SLAMF6Q96DU3 332 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 COPS4Q9BT78 406 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 ARMC1Q9NVT9 282 aa13.28□□□□□ -0.28
CRLF3-203ENST00000578692 C5orf63A6NC05 138 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 FAM20BO75063 409 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 IFNGP01579 166 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 ANOS1P23352 680 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 BLVRAP53004 296 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.29
CRLF3-203ENST00000578692 TUSC1Q2TAM9 212 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 GLYATL3Q5SZD4 288 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 DCDC5Q6ZRR9 648 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 BCL6BQ8N143 479 aaPredicted RBP13.27□□□□□ -0.29
CRLF3-203ENST00000578692 C3orf56Q8N813 242 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 CCDC197Q8NCU1 140 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 LRGUKQ96M69 825 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 NIPSNAP1Q9BPW8 284 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 PRPF19Q9UMS4 504 aaKnown RBP13.27□□□□□ -0.29
CRLF3-203ENST00000578692 N6AMT1Q9Y5N5 214 aa13.27□□□□□ -0.29
CRLF3-203ENST00000578692 IGHV2-70DA0A0C4DH43 119 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 KIR2DS1A0A191URI9 304 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 RIIAD1A6NNX1 92 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 ZNF878C9JN71 531 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 FAM107AO95990 144 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 CST1P01037 141 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 PPIAL4GP0DN37 164 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 RAP2AP10114 183 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 SLC15A1P46059 708 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 PITPNBP48739 271 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 CD300LDQ6UXZ3 194 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 DOK3Q7L591 496 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 PLPP7Q8NBV4 271 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 C19orf18Q8NEA5 215 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 OR10G2Q8NGC3 310 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 OR6K6Q8NGW6 343 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 ASB9Q96DX5 294 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 FEVQ99581 238 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 ADAT1Q9BUB4 502 aaKnown RBP13.26□□□□□ -0.29
CRLF3-203ENST00000578692 MS4A7Q9GZW8 240 aaPredicted RBP13.26□□□□□ -0.29
CRLF3-203ENST00000578692 FN3KRPQ9HA64 309 aa13.26□□□□□ -0.29
CRLF3-203ENST00000578692 CMC2Q9NRP2 79 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms