RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 AVPI1Q5T686 147 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 RHOUQ7L0Q8 258 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 SLC16A9Q7RTY1 509 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 SPRYD4Q8WW59 207 aaPredicted RBP17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 ITLN1Q8WWA0 313 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 TIMD4Q96H15 378 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 OR2V2Q96R30 315 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 IL19Q9UHD0 177 aa17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 FN1P02751 2386 aaKnown RBP17.55■□□□□ 0.4
HCFC1R1-208ENST00000575214 SLC3A1Q07837 685 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 NXNL2Q5VZ03 156 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 CLDND2Q8NHS1 167 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 HPS1Q92902 700 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 MSI2Q96DH6 328 aaKnown RBP17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 SLC30A2Q9BRI3 323 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 SOX7Q9BT81 388 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 YIPF3Q9GZM5 350 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 SP140LQ9H930 580 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 BRD7Q9NPI1 651 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 TMEM100Q9NV29 134 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 KLHDC2Q9Y2U9 406 aa17.54■□□□□ 0.4
HCFC1R1-208ENST00000575214 LOC100289279A0A1B0GTE1 492 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 GGT3PA6NGU5 568 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 WNT9BO14905 357 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 XRCC2O43543 280 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 ALPLP05186 524 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 HCCSP53701 268 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 ZNF121P58317 390 aaPredicted RBP17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 EFNB1P98172 346 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 FAM57BQ71RH2 274 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 MEPCEQ7L2J0 689 aaKnown RBP17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 RAB1CQ92928 201 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 POM121Q96HA1 1249 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 CNN2Q99439 309 aaKnown RBP17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 OPA3Q9H6K4 179 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 USE1Q9NZ43 259 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 WIPI2Q9Y4P8 454 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 SLC22A31A6NKX4 558 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 CD300LBA8K4G0 201 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 H0YL77 283 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 MLNRO43193 412 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 ALOX5APP20292 161 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 ALDH3A2P51648 485 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 RAD23AP54725 363 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 TIGD6Q17RP2 521 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 AADACL4Q5VUY2 407 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 FAM166AQ6J272 317 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 LRRN1Q6UXK5 716 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 KRT77Q7Z794 578 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 GID4Q8IVV7 300 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 CBR4Q8N4T8 237 aa17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 REPIN1Q9BWE0 567 aaKnown RBP17.53■□□□□ 0.4
HCFC1R1-208ENST00000575214 TGFAP01135 160 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 HLA-DPB1P04440 258 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 SRP9P49458 86 aaKnown RBP17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 CDC42P60953 191 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 HNRNPA0Q13151 305 aaKnown RBP17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 PEG10Q86TG7 708 aaKnown RBP17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 PQLC1Q8N2U9 271 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 STMN2Q93045 179 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 PGAM5Q96HS1 289 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 MEGF10Q96KG7 1140 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 C9orf16Q9BUW7 83 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 OR10A2Q9H208 303 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 TMEM106BQ9NUM4 274 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 KCNS2Q9ULS6 477 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 PPP1R3CQ9UQK1 317 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 TMEM14AQ9Y6G1 99 aa17.52■□□□□ 0.39
HCFC1R1-208ENST00000575214 ISPDA4D126 451 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 F5H5P2 479 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 LMX1BO60663 402 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 BAG2O95816 211 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 GFOD2Q3B7J2 385 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 ZIK1Q3SY52 487 aaPredicted RBP17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 KCTD18Q6PI47 426 aaPredicted RBP17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 LINC01356Q8N9X3 169 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 OR56B2PQ8NGI1 322 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 OR52H1Q8NGJ2 320 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 FAM81AQ8TBF8 368 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 REEP6Q96HR9 211 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 TTTY10Q9BZA0 68 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 NIPAL2Q9H841 368 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 DCAF16Q9NXF7 216 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 LRP12Q9Y561 859 aa17.51■□□□□ 0.39
HCFC1R1-208ENST00000575214 IGHV3-64DA0A0J9YX35 117 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 PSMD9O00233 223 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 CA6P23280 308 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 ANK3Q12955 4377 aaKnown RBP17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 OR8G1Q15617 311 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 KRTAP21-3Q3LHN1 58 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 PRSS45Q7RTY3 260 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 OR8J1Q8NGP2 316 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 ASB17Q8WXJ9 295 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 SPSB4Q96A44 273 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 SLC22A4Q9H015 551 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 GCM1Q9NP62 436 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 IMPAD1Q9NX62 359 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 COPS3Q9UNS2 423 aa17.5■□□□□ 0.39
HCFC1R1-208ENST00000575214 NOP16Q9Y3C1 178 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms