RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MEP1BQ16820 701 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 VMACQ2NL98 169 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 C11orf88Q6PI97 169 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 DUX4L9Q6RFH8 374 aaPredicted RBP9.98□□□□□ -0.81
PRPF8-208ENST00000573716 PGAP1Q75T13 922 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 H1FXQ92522 213 aaKnown RBP9.98□□□□□ -0.81
PRPF8-208ENST00000573716 CCL13Q99616 98 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 COQ7Q99807 217 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 POLR2J2Q9GZM3 115 aaKnown RBP9.98□□□□□ -0.81
PRPF8-208ENST00000573716 HDHD2Q9H0R4 259 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 POLR2J3Q9H1A7 115 aaKnown RBP9.98□□□□□ -0.81
PRPF8-208ENST00000573716 SYT4Q9H2B2 425 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 KAT8Q9H7Z6 458 aaKnown RBP9.98□□□□□ -0.81
PRPF8-208ENST00000573716 RHCGQ9UBD6 479 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 DUX4Q9UBX2 424 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 AURKCQ9UQB9 309 aa9.98□□□□□ -0.81
PRPF8-208ENST00000573716 RYR3Q15413 4870 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 LOC100653049A0A140TA62 436 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 A0A1B0GWJ7 208 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 K7EIL1 84 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 IMPA2O14732 288 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 KRT34O76011 436 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 CD14P08571 375 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 CD28P10747 220 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 IGLL1P15814 213 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 CD33P20138 364 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 IFNA8P32881 189 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 KIR2DS4P43632 304 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 GPR4P46093 362 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 YAP1P46937 504 aaKnown RBP9.97□□□□□ -0.81
PRPF8-208ENST00000573716 SLC18A1P54219 525 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 EMX1Q04741 257 aaPredicted RBP9.97□□□□□ -0.81
PRPF8-208ENST00000573716 ST3GAL3Q11203 375 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 ECH1Q13011 328 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 IKZF1Q13422 519 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 KRR1Q13601 381 aaKnown RBP9.97□□□□□ -0.81
PRPF8-208ENST00000573716 LNX2Q8N448 690 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 GJC3Q8NFK1 279 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 OR4F17Q8NGA8 305 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 RORBQ92753 470 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 TPD52L3Q96J77 140 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 WWC2-AS2Q96NR7 200 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 OR4F4Q96R69 305 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 SSX3Q99909 188 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 NDUFAF1Q9Y375 327 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 NOP16Q9Y3C1 178 aaKnown RBP9.97□□□□□ -0.81
PRPF8-208ENST00000573716 LHFPL6Q9Y693 200 aa9.97□□□□□ -0.81
PRPF8-208ENST00000573716 GGT3PA6NGU5 568 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 SOCS2O14508 198 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 AHCYL1O43865 530 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 ACSM4P0C7M7 580 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 GGT2P36268 569 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 CD69Q07108 199 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 FHL1Q13642 323 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 TNFAIP8L3Q5GJ75 292 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 METAP1DQ6UB28 335 aaPredicted RBP9.96□□□□□ -0.82
PRPF8-208ENST00000573716 CCDC80Q76M96 950 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 NAA40Q86UY6 237 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 LINC00346Q8IVM7 164 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 MREGQ8N565 214 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 GCSAMQ8N6F7 178 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 FAM216BQ8N7L0 139 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 OR51G2Q8NGK0 314 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 LZICQ8WZA0 190 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 PITX2Q99697 317 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 CCDC28BQ9BUN5 200 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 NDEL1Q9GZM8 345 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 SLC22A4Q9H015 551 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 NUAK2Q9H093 628 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 FAM234AQ9H0X4 552 aa9.96□□□□□ -0.82
PRPF8-208ENST00000573716 A0A1W2PRX2 142 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 HTR3EA5X5Y0 456 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 CD300LBA8K4G0 201 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 NDUFB3O43676 98 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 GMDSO60547 372 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 PAX6P26367 422 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 GMFBP60983 142 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 PRKCDQ05655 676 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 HABP2Q14520 560 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-208ENST00000573716 MICBQ29980 383 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 RSPO1Q2MKA7 263 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-208ENST00000573716 ANKDD1AQ495B1 522 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 ZBED5Q49AG3 693 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 LRRC23Q53EV4 343 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-208ENST00000573716 WDR38Q5JTN6 314 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 ZNF730Q6ZMV8 503 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 COLCA1Q6ZS62 124 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 Q8N7P7 452 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 LY6G5BQ8NDX9 201 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 LRRC29Q8WV35 223 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 C17orf50Q8WW18 174 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 PRRC1Q96M27 445 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-208ENST00000573716 FNDC11Q9BVV2 318 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRPF8-208ENST00000573716 MAB21L2Q9Y586 359 aa9.95□□□□□ -0.82
PRPF8-208ENST00000573716 V9GYY5 206 aaPredicted RBP9.95□□□□□ -0.82
PRPF8-208ENST00000573716 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.94□□□□□ -0.82
PRPF8-208ENST00000573716 A0A1W2PQ09 198 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms