RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LMX1AQ8TE12 382 aa15.54■□□□□ 0.08
SCARF1-205ENST00000571272 ASB10Q8WXI3 467 aa15.54■□□□□ 0.08
SCARF1-205ENST00000571272 OR2S2Q9NQN1 319 aa15.54■□□□□ 0.08
SCARF1-205ENST00000571272 MED12Q93074 2177 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 TEX13DA0A0J9YY54 714 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-205ENST00000571272 FTCDNL1E5RQL4 147 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 FAHD2BQ6P2I3 314 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-205ENST00000571272 TMEM104Q8NE00 496 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 OR4A4PQ8NGN8 299 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 PHF3Q92576 2039 aaKnown RBP15.53■□□□□ 0.08
SCARF1-205ENST00000571272 SLAMF6Q96DU3 332 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 FAHD2AQ96GK7 314 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 NUDT22Q9BRQ3 303 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 SOX7Q9BT81 388 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 PBOV1Q9GZY1 135 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 DUSP15Q9H1R2 295 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-205ENST00000571272 FAM206AQ9NX38 181 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 DBX1A6NMT0 343 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 BPNT1O95861 308 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 MPZP25189 248 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 MMP16P51512 607 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 DCAF7P61962 342 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 SGCAQ16586 387 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 MICBQ29980 383 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 C1orf189Q5VU69 101 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 SLC29A4Q7RTT9 530 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 RNF133Q8WVZ7 376 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 ARL11Q969Q4 196 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 TMEM41AQ96HV5 264 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 BANF2Q9H503 90 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 CYTL1Q9NRR1 136 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 COPS7AQ9UBW8 275 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 CD207Q9UJ71 328 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 VDAC3Q9Y277 283 aa15.53■□□□□ 0.08
SCARF1-205ENST00000571272 F8VVB4 439 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 F8VWA3 439 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 MPIG6BO95866 241 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 SLC2A1P11166 492 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 ZNF93P35789 620 aaPredicted RBP15.52■□□□□ 0.08
SCARF1-205ENST00000571272 DNM1P34Q6PK57 102 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 KLHL24Q6TFL4 600 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 COMMD2Q86X83 199 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 THAP3Q8WTV1 239 aaPredicted RBP15.52■□□□□ 0.08
SCARF1-205ENST00000571272 RNF141Q8WVD5 230 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 C11orf40Q8WZ69 217 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 CPNE2Q96FN4 548 aaPredicted RBP15.52■□□□□ 0.08
SCARF1-205ENST00000571272 C5orf34Q96MH7 638 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 FAM96BQ9Y3D0 163 aa15.52■□□□□ 0.08
SCARF1-205ENST00000571272 IGHV3-20A0A0C4DH32 117 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 A0A1W2PP11 408 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 SHISA8B8ZZ34 492 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 SOCS1O15524 211 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 H2AFB1P0C5Y9 115 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 ABOP16442 354 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 BCKDHBP21953 392 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 FASLGP48023 281 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 NPBWR1P48145 328 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 PNLIPRP2P54317 469 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 CLDN6P56747 220 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 LANCL3Q6ZV70 420 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 HOGA1Q86XE5 327 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 OR10H5Q8NGA6 315 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 OR5D14Q8NGL3 314 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 STOML3Q8TAV4 291 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 OR51E1Q8TCB6 317 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 DAZLQ92904 295 aaKnown RBP15.52■□□□□ 0.07
SCARF1-205ENST00000571272 KCNK17Q96T54 332 aa15.52■□□□□ 0.07
SCARF1-205ENST00000571272 CDCA3Q99618 268 aaPredicted RBP15.52■□□□□ 0.07
SCARF1-205ENST00000571272 A0A0A6YYD4 124 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 TLCD2A6NGC4 264 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF705EA8MWA4 302 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-205ENST00000571272 H3BML4 177 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 CD79AP11912 226 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 TLE3Q04726 772 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 TDGQ13569 410 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF585AQ6P3V2 769 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 DTWD2Q8NBA8 298 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF784Q8NCA9 323 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-205ENST00000571272 SLC30A7Q8NEW0 376 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 TERB2Q8NHR7 220 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 CNTNAP3BQ96NU0 1288 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 HRH4Q9H3N8 390 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 C5orf66Q9H5L9 145 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 OR5AC2Q9NZP5 309 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 A6NIZ1 184 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF98A6NK75 572 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 RAP1BP61224 184 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 RAP1AP62834 184 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 PCK2Q16822 640 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 GLIPR1L1Q6UWM5 242 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 SPAG16Q8N0X2 631 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 MMP17Q9ULZ9 603 aa15.51■□□□□ 0.07
SCARF1-205ENST00000571272 HSF1Q00613 529 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 DEFB133Q30KQ1 61 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 TMEM128Q5BJH2 165 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 PLAC9Q5JTB6 97 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 DEGS2Q6QHC5 323 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 OR10S1Q8NGN2 331 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 TMEM230Q96A57 120 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 MESP1Q9BRJ9 268 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms